Abstract. PISCES-v2 (Pelagic Interactions Scheme for Carbon and Ecosystem Studies volume 2) is a biogeochemical model which simulates the lower trophic levels of marine ecosystems (phytoplankton, microzooplankton and mesozooplankton) and the biogeochemical cycles of carbon and of the main nutrients (P, N, Fe, and Si). The model is intended to be used for both regional and global configurations at high or low spatial resolutions as well as for short-term (seasonal, interannual) and long-term (climate change, paleoceanography) analyses. There are 24 prognostic variables (tracers) including two phytoplankton compartments (diatoms and nanophytoplankton), two zooplankton size classes (microzooplankton and mesozooplankton) and a description of the carbonate chemistry. Formulations in PISCES-v2 are based on a mixed Monod-quota formalism. On the one hand, stoichiometry of C / N / P is fixed and growth rate of phytoplankton is limited by the external availability in N, P and Si. On the other hand, the iron and silicon quotas are variable and the growth rate of phytoplankton is limited by the internal availability in Fe. Various parameterizations can be activated in PISCES-v2, setting, for instance, the complexity of iron chemistry or the description of particulate organic materials. So far, PISCES-v2 has been coupled to the Nucleus for European Modelling of the Ocean (NEMO) and Regional Ocean Modeling System (ROMS) systems. A full description of PISCES-v2 and of its optional functionalities is provided here. The results of a quasi-steady-state simulation are presented and evaluated against diverse observational and satellite-derived data. Finally, some of the new functionalities of PISCES-v2 are tested in a series of sensitivity experiments.

Abstract. Anthropogenic climate change is projected to lead to ocean warming, acidification, deoxygenation, reductions in near-surface nutrients, and changes to primary production, all of which are expected to affect marine ecosystems. Here we assess projections of these drivers of environmental change over the twenty-first century from Earth system models (ESMs) participating in the Coupled Model Intercomparison Project Phase 6 (CMIP6) that were forced under the CMIP6 Shared Socioeconomic Pathways (SSPs). Projections are compared to those from the previous generation (CMIP5) forced under the Representative Concentration Pathways (RCPs). A total of 10 CMIP5 and 13 CMIP6 models are used in the two multi-model ensembles. Under the high-emission scenario SSP5-8.5, the multi-model global mean change (2080–2099 mean values relative to 1870–1899) ± the inter-model SD in sea surface temperature, surface pH, subsurface (100–600 m) oxygen concentration, euphotic (0–100 m) nitrate concentration, and depth-integrated primary production is +3.47±0.78 ∘C, -0.44±0.005, -13.27±5.28, -1.06±0.45 mmol m−3 and -2.99±9.11 %, respectively. Under the low-emission, high-mitigation scenario SSP1-2.6, the corresponding global changes are +1.42±0.32 ∘C, -0.16±0.002, -6.36±2.92, -0.52±0.23 mmol m−3, and -0.56±4.12 %. Projected exposure of the marine ecosystem to these drivers of ocean change depends largely on the extent of future emissions, consistent with previous studies. The ESMs in CMIP6 generally project greater warming, acidification, deoxygenation, and nitrate reductions but lesser primary production declines than those from CMIP5 under comparable radiative forcing. The increased projected ocean warming results from a general increase in the climate sensitivity of CMIP6 models relative to those of CMIP5. This enhanced warming increases upper-ocean stratification in CMIP6 projections, which contributes to greater reductions in upper-ocean nitrate and subsurface oxygen ventilation. The greater surface acidification in CMIP6 is primarily a consequence of the SSPs having higher associated atmospheric CO2 concentrations than their RCP analogues for the same radiative forcing. We find no consistent reduction in inter-model uncertainties, and even an increase in net primary production inter-model uncertainties in CMIP6, as compared to CMIP5.

Hydrothermal venting along mid-ocean ridges exerts an important control on the chemical composition of sea water by serving as a major source or sink for a number of trace elements in the ocean. Of these, iron has received considerable attention because of its role as an essential and often limiting nutrient for primary production in regions of the ocean that are of critical importance for the global carbon cycle. It has been thought that most of the dissolved iron discharged by hydrothermal vents is lost from solution close to ridge-axis sources and is thus of limited importance for ocean biogeochemistry. This long-standing view is challenged by recent studies which suggest that stabilization of hydrothermal dissolved iron may facilitate its long-range oceanic transport. Such transport has been subsequently inferred from spatially limited oceanographic observations. Here we report data from the US GEOTRACES Eastern Pacific Zonal Transect (EPZT) that demonstrate lateral transport of hydrothermal dissolved iron, manganese, and aluminium from the southern East Pacific Rise (SEPR) several thousand kilometres westward across the South Pacific Ocean. Dissolved iron exhibits nearly conservative (that is, no loss from solution during transport and mixing) behaviour in this hydrothermal plume, implying a greater longevity in the deep ocean than previously assumed. Based on our observations, we estimate a global hydrothermal dissolved iron input of three to four gigamoles per year to the ocean interior, which is more than fourfold higher than previous estimates. Complementary simulations with a global-scale ocean biogeochemical model suggest that the observed transport of hydrothermal dissolved iron requires some means of physicochemical stabilization and indicate that hydrothermally derived iron sustains a large fraction of Southern Ocean export production.

The micronutrient iron is now recognized to be important in regulating the magnitude and dynamics of ocean primary productivity, making it an integral component of the ocean's biogeochemical cycles. In this Review, we discuss how a recent increase in observational data for this trace metal has challenged the prevailing view of the ocean iron cycle. Instead of focusing on dust as the major iron source and emphasizing iron's tight biogeochemical coupling to major nutrients, a more complex and diverse picture of the sources of iron, its cycling processes and intricate linkages with the ocean carbon and nitrogen cycles has emerged.

Numerical models of ocean biogeochemistry are relied upon to make projections about the impact of climate change on marine resources and test hypotheses regarding the drivers of past changes in climate and ecosystems. In large areas of the ocean, iron availability regulates the functioning of marine ecosystems and hence the ocean carbon cycle. Accordingly, our ability to quantify the drivers and impacts of fluctuations in ocean ecosystems and carbon cycling in space and time relies on first achieving an appropriate representation of the modern marine iron cycle in models. When the iron distributions from 13 global ocean biogeochemistry models are compared against the latest oceanic sections from the GEOTRACES program, we find that all models struggle to reproduce many aspects of the observed spatial patterns. Models that reflect the emerging evidence for multiple iron sources or subtleties of its internal cycling perform much better in capturing observed features than their simpler contemporaries, particularly in the ocean interior. We show that the substantial uncertainty in the input fluxes of iron results in a very wide range of residence times across models, which has implications for the response of ecosystems and global carbon cycling to perturbations. Given this large uncertainty, iron fertilization experiments based on any single current generation model should be interpreted with caution. Improvements to how such models represent iron scavenging and also biological cycling are needed to raise confidence in their projections of global biogeochemical change in the ocean.