Abstract. The VAHINE mesocosm experiment, conducted in the low-nutrient low-chlorophyll waters of the Noumea lagoon (coastal New Caledonia) was designed to trace the incorporation of nitrogen (N) fixed by diazotrophs into the food web, using large volume (50 m3) mesocosms. This experiment provided a unique opportunity to study the succession of different N2-fixing microorganisms (diazotrophs) and calculate in situ net growth and mortality rates in response to fertilization with dissolved inorganic phosphate (DIP) over a 23-day period, using quantitative polymerase chain reaction (qPCR) assays targeting widely distributed marine diazotroph lineages. Inside the mesocosms, the most abundant diazotroph was the heterocyst-forming Richelia associated with Rhizosolenia (Het-1) in the first half of the experiment, while unicellular cyanobacterial Group C (UCYN-C) became abundant during the second half of the experiment. Decreasing DIP concentrations following the fertilization event and increasing temperatures were significantly correlated with increasing abundances of UCYN-C. Maximum net growth rates for UCYN-C were calculated to range between 1.23 ± 0.07 and 2.16 ± 0.07 d−1 in the mesocosms, which are among the highest growth rates reported for diazotrophs. Outside the mesocosms in the New Caledonia lagoon, UCYN-C abundances remained low, despite increasing temperatures, suggesting that the microbial community response to the DIP fertilization created conditions favorable for UCYN-C growth inside the mesocosms. Diazotroph community composition analysis using PCR targeting a component of the nitrogenase gene (nifH) verified that diazotrophs targeted in qPCR assays were collectively among the major lineages in the lagoon and mesocosm samples, with the exception of Crocosphaera-like phylotypes, where sequence types not typically seen in the oligotrophic ocean grew in the mesocosms. Maximum net growth and mortality rates for nine diazotroph phylotypes throughout the 23-day experiment were variable between mesocosms, and repeated fluctuations between periods of net growth and mortality were commonly observed. The field population of diazotrophs in the New Caledonian lagoon waters appeared to be dominated by Het-1 over the course of the study period. However, results from both qPCR and PCR analysis indicated a diverse field population of diazotrophs was present in the lagoon at the time of sampling. Two ecotypes of the Braarudosphaera bigelowii symbiont unicellular group A (UCYN-A) were present simultaneously in the lagoon, with the recently described B. bigelowii/UCYN-A2 association present at higher abundances than the B. bigelowii/UCYN-A1 association.

Biological dinitrogen (N2) fixation and the distribution of diazotrophic phylotypes were investigated during two cruises in the Coral Sea and the Solomon Sea (southwestern Pacific) during austral winter conditions. N2 fixation rates were measurable at every station, but integrated (0–150 m) rates were an order of magnitude higher in the Solomon Sea (30 to 5449 µmol N m−2 d−1) compared to those measured in the Coral Sea (2 to 109 µmol N m−2 d−1). Rates measured in the Solomon Sea were in the upper range (100–1000 µmol N m−2 d−1) or higher than rates compiled in the global MARine Ecosystem biomass DATa database, indicating that this region has some of the highest N2 fixation rates reported in the global ocean. While unicellular diazotrophic cyanobacteria from group A (UCYN‐A1 and UCYN‐A2) and the proteobacteria γ‐24774A11 dominated in the Coral Sea and were correlated with N2 fixation rates (p < 0.05), Trichodesmium and UCYN‐B dominated in the Solomon Sea and were correlated (p < 0.05) with N2 fixation rates. UCYN‐A were totally absent in the Solomon Sea. The biogeographical distribution of diazotrophs is discussed within the context of patterns in measured environmental parameters.