Abrupt change in climate or simply termed as climate change is considered to be one of the major challenges in biodiversity. Change in climate has impacted many species around the world, particularly threatened species like One-Horned Rhinoceros (Rhinoceros unicornis). Rhinoceros unicornis is placed as an endangered species by International Union for Conservation of Nature (IUCN). Being an endangered species, studies regarding the impact of climate on the distribution of Rhinoceros unicornis is very rare in Nepal. Thus, the present study focuses on identifying the potential impact of climate change on the suitable habitat of Rhinoceros unicornis in Nepal using Species Distribution Modelling (SDM). For this, we used the present climatic scenarios and two greenhouse concentration trajectories (RCP 4.5 and RCP 8.5) for two different time periods (2050 and 2070) using different bioclimatic variables. Our model demonstrated the loose of the suitable habitat of Rhincoeros unicornis by 51.87% and 56.54% in RCP 4.5 for year 2050 and 2070 respectively. Under RCP 8.5 for year 2050 and 2070, the model demonstrated the loose of present suitable habitat by 54.25% and 49.51% respectively. Likewise, our result also predicted elevation as an important bioclimatic variable. This study would provide an information to the policy makers, conservationist and government officer of Nepal for the management and protection of habitat of Rhinoceros unicornis in present and future climatic context.