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Phylogenetic relationships within the Italian species of the lacertid genus Podarcis were examined by parsimony analysis of mitochondrial DNA sequences from the genes encoding the small ribosomal RNA and the phenyl transfer RNA. Lacerta viridis was used as outgroup and Teira dugesii was also included in the ingroup. The 80 phylogenetically informative positions produced four most parsimonious trees, with the Italian Podarcis split into three groups: the first comprised P. filfolensis, P. melisellensis. P. wagleriaria, P. muralis, and P. raffonei, the second P. sicula with its various subspecies. The third lineage was that of P. tiliguerta, whose relationships were resolved as more closely related to the first clade, when weighting transversion three times transitions. Bootstrap analyses on a subset of sequences representing all species herein studied, supported the results from the larger dataset. The present results are only partly in agreement with previous hypotheses based on morphology, immunology, and allozyme variation analyses.

The Italian Peninsula was one of the main refugia in southern Europe during the climatic oscillations of the Pleistocene, and was considered a 'hotspot' of biodiversity. A number of phylogeographic analyses identified highly divergent lineages in Italy that apparently did not contribute to the post-glacial re-colonization of Europe, supporting the existence of refugia within refugia in the southern-most part of Italy. For the bank vole Myodes glareolus, genetic analyses highlighted a low variability for this species on the Italian peninsula, suggesting that cryptic refugia of central Europe were the main source of postglacial re-colonization in Europe. In this work, we analysed the mtDNA phylogeography of M. glareolus with a special emphasis on the Italian refugium. We extended previous analyses by including new sequences from a wider range of samples across the Italian peninsula. Our results suggest a high mitochondrial diversity of the bank vole in Italy and support the existence of an ancient and deeply divergent population in the Calabria region. This population did not participate to the recent re-colonization of Italy while we highlight the possible occurrence of multiple and more recent colonization events between Europe and Italy. The phylogeographic pattern observed in Italy appears compatible with refugia-within-refugia scenario. © 2011 The Zoological Society of London

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