Microscopic imaging is of great significance for medical diagnosis. However, due to the strong scattering and absorption of tissue, the implementation of non-invasive microscopic imaging is very difficult. Traditional single-pixel microscopes, based on reflective optical systems, provide an alternative solution for scattering media imaging. Here, the single-pixel microscope with transmissive liquid crystal modulation is proposed. The microscopic ability of the proposed microscope is calibrated. The multi-spectral microscopic imaging of the object is demonstrated. The transmissive imaging of the object behind the scattering media is analyzed. The proposed prototype of the transmissive single-pixel microscope is expected to be applied in microscopic imaging through scattering media and medical imaging.