Central bearded dragons (Pogona vitticeps) are one of the most popular reptile pets in Australia and around the world. Diseases, including metabolic bone disease, periodontal disease, and gastrointestinal endoparasites commonly affect captive animals. To determine the common reasons these lizards were presented to the veterinarian and to establish the prevalence of disease seen in captive P. vitticeps in Australia, this retrospective study evaluated the clinical records of three exotic pet veterinary hospitals. Records from 724 P. vitticeps were analysed, with 70 reasons for presentation and 88 diseases identified across 1000 visits to the veterinarian. Lethargy was the most reported reason for presentation (n = 181). The gastrointestinal tract (18.25%) and skin (18.25%) were the equally most commonly affected organ systems, followed by the musculoskeletal system (15.17%). Endoparasites were the most common single disease process (n = 103), followed by metabolic bone disease (n = 65), skin wounds (n = 59) and periodontal disease (n = 48). Of the patients that presented for routine preventive health examinations (n = 159), 45.30% received some form of intervention to treat or prevent disease. Many of the conditions that were identified by the veterinarians in this study are traditionally correlated with suboptimal husbandry and may be easily prevented. This study identified the common reasons for presentation to the veterinarian and the prevalence of disease in captive P. vitticeps in Australia, providing the first extensive retrospective analysis of objective reference literature for central bearded dragon owners and aspiring reptile veterinarians.