The growth of Next Generation Sequencing technologies presents significant research challenges, specifically to design bioinformatics tools that handle massive amount of data efficiently. Biological sequence data storage cost has become a noticeable proportion of total cost in the generation and analysis. Particularly increase in DNA sequencing rate is significantly outstripping the rate of increase in disk storage capacity, which may go beyond the limit of storage capacity. It is essential to develop algorithms that handle large data sets via better memory management. This article presents a DNA sequence compression algorithm SeqCompress that copes with the space complexity of biological sequences. The algorithm is based on lossless data compression and uses statistical model as well as arithmetic coding to compress DNA sequences. The proposed algorithm is compared with recent specialized compression tools for biological sequences. Experimental results show that proposed algorithm has better compression gain as compared to other existing algorithms.
Curvature has a great effect on fringing field of a microstrip antenna and consequently fringing field affects effective dielectric constant and then all antenna parameters. A new mathematical model for input impedance, return loss and voltage standing wave ratio is introduced in this paper. These parameters are given for TM 01 mode and using two different substrate materials K-6098 Teflon/Glass and Epsilam-10 Ceramic-Filled Teflon materials.
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