505I.506II.506III.508IV.512V.513VI.514515References515 Summary Fine roots acquire essential soil resources and mediate biogeochemical cycling in terrestrial ecosystems. Estimates of carbon and nutrient allocation to build and maintain these structures remain uncertain because of the challenges of consistently measuring and interpreting fine‐root systems. Traditionally, fine roots have been defined as all roots ≤ 2 mm in diameter, yet it is now recognized that this approach fails to capture the diversity of form and function observed among fine‐root orders. Here, we demonstrate how order‐based and functional classification frameworks improve our understanding of dynamic root processes in ecosystems dominated by perennial plants. In these frameworks, fine roots are either separated into individual root orders or functionally defined into a shorter‐lived absorptive pool and a longer‐lived transport fine‐root pool. Using these frameworks, we estimate that fine‐root production and turnover represent 22% of terrestrial net primary production globally – a c. 30% reduction from previous estimates assuming a single fine‐root pool. Future work developing tools to rapidly differentiate functional fine‐root classes, explicit incorporation of mycorrhizal fungi into fine‐root studies, and wider adoption of a two‐pool approach to model fine roots provide opportunities to better understand below‐ground processes in the terrestrial biosphere.

Predominant frameworks for understanding plant ecology have an aboveground bias that neglects soil micro-organisms. This is inconsistent with recent work illustrating the importance of soil microbes in terrestrial ecology. Microbial effects have been incorporated into plant community dynamics using ideas of niche modification and plant-soil community feedbacks. Here, we expand and integrate qualitative conceptual models of plant niche and feedback to explore implications of microbial interactions for understanding plant community ecology. At the same time we review the empirical evidence for these processes. We also consider common mycorrhizal networks, and suggest these are best interpreted within the feedback framework. Finally, we apply our integrated model of niche and feedback to understanding plant coexistence, monodominance, and invasion ecology. Plant Community Ecology Models Overlook Soil Microbial InteractionsCommunities of competing plant species are stabilized by stronger negative intraspecific interactions relative to interspecific interactions [1]. Traditionally, strong negative intraspecific interactions have been thought to result from high resource use overlap [2,3]. These models of resource partitioning have been developed into an influential framework for understanding plant community dynamics, but the empirical evidence supporting them is still limited. Plant competition experiments have not shown unequivocally that the strength of intraspecific competition exceeds that of interspecific competition [4] and the empirical evidence of coexistence of competing plant species through resource partitioning remains mixed [5][6][7].In response to the perceived limitations of explaining species coexistence through resource partitioning, plant ecologists have increasingly looked for mechanisms that might limit the negative effect of competition on inferior competitors and thereby slow competitive exclusion. For instance, competition-colonization tradeoffs can allow inferior competitors to persist through their greater likelihood of establishing in transient gaps in vegetation [8].© 2010 Elsevier Ltd. All rights reserved.Corresponding author: Bever, J. D. (jbever@indiana.edu). Publisher's Disclaimer: This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final citable form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. Current theory neglects the less visible organisms in the soil and this might be one reason for the limited success in finding a mechanism to explain the coexistence of competing plant species. The presence and composition of soil microbial communities has been shown to have large impacts on plant-plant interactions [14][15][16] and con...

Community assembly history is increasingly recognized as a fundamental determinant of community structure. However, little is known as to how assembly history may affect ecosystem functioning via its effect on community structure. Using wood-decaying fungi as a model system, we provide experimental evidence that large differences in ecosystem functioning can be caused by small differences in species immigration history during community assembly. Direct manipulation of early immigration history resulted in three-fold differences in fungal species richness and composition and, as a consequence, differences of the same magnitude in the rate of decomposition and carbon release from wood. These effects - which were attributable to the history-dependent outcome of competitive and facilitative interactions - were significant across a range of nitrogen availabilities observed in natural forests. Our results highlight the importance of considering assembly history in explaining ecosystem functioning.

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Understanding the factors that drive soil carbon (C) accumulation is of fundamental importance given their potential to mitigate climate change. Much research has focused on the relationship between plant traits and C sequestration, but no studies to date have quantitatively considered traits of their mycorrhizal symbionts. Here, we use a modelling approach to assess the contribution of an important mycorrhizal fungal trait, organic nutrient uptake, to soil C accumulation. We show that organic nutrient uptake can significantly increase soil C storage, and that it has a greater effect under nutrient-limited conditions. The main mechanism behind this was an increase in plant C fixation and subsequent increased C inputs to soil through mycorrhizal fungi. Reduced decomposition due to increased nutrient limitation of saprotrophs also played a role. Our results indicate that direct uptake of nutrients from organic pools by mycorrhizal fungi could have a significant effect on ecosystem C cycling and storage.