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This article presents DLNotes2, a tool that supports the creation of structured and semantic (ontology-based) annotations on HTML documents. DLNotes2 can be easily integrated with Virtual Learning Environments. It allows creating learning activities within which the students' task is to make annotations on certain contents. The Knowledge Base generated in the semantic annotation process can be graphically visualized and edited, allowing both teachers and learners to access the produced knowledge. This article also presents a use case of DLNotes2 in literature teaching.