The Grand Calumet River is an industrial river and a Great Lakes Area of Concern in southwestern Lake Michigan, USA. Recovery end points require well-formulated designs to assess the use of occurrence of internal and external anomalies, fluctuating asymmetry, and population indicators to determine recovery from the water-quality Beneficial Use Impairments of fish tumors and deformities. A paired-watershed approach using three reaches within the study area was sampled weekly and separated into near- and far-field reaches, whereas the Little Calumet River, Indiana Dunes National Lakeshore, served as a control. Field-collected Pimephales notatus were inspected for occurrence of deformities, erosion, lesion, and tumor (DELT) anomalies, measured for body symmetry, and dissected to ascertain sex and the condition of internal organs. Morphometric measurements (p ≤ 0.000), internal organ conditions (p = 0.001), and sex ratios of the fish (p = 0.001) were significantly different between the control and P. notatus test populations. The near-field individuals had the highest incidence of DELT occurrence (70 %) followed by the far-field reaches at Roxana Marsh (45 %) and Kennedy Avenue (41.9 %). Morphometric analysis showed significant differences between body size and shape and age class structure between populations. No test-reach individual lived to reach age >2 years. Gonads and livers from Grand Calumet individuals were found to be blackened, ruptured, and decreased in thickness. None of the fish from test study reaches displayed sexual structure in a 1:1 ratio. High sediment-contaminant concentrations for polycyclic aromatic hydrocarbon metals in the Grand Calumet River correlated (r (2) = 0.998) with decreased population fitness and decreased individual reproductive health.

Spatial distributions of crayfish were evaluated in relation to glacial geography and possible modes of dispersal from refugia. Species dispersal patterns were a priori hypothesized and tested using principle components analysis (PCA). PCA factor loading plots were evaluated for hypothesized crayfish dispersal patterns. Cambarus laevis was limited to the unglaciated region, while Orconectes immunis, Orconectes virilis, and Procambarus gracilis may have dispersed from western glacial refugia in the upper Missouri drainage. Fallicambarus fodiens and Procambarus acutus dispersed from south of the glacial advance within the Mississippi embayment. Previous dispersal hypotheses for Orconectes propinquus recognized that northern refugia may have been from the Driftless Area in Wisconsin and Illinois and may have invaded more than one refuge since this species was common in unglaciated areas of southwestern Indiana. Orconectes indianensis center of abundance is in the unglaciated region. Disjunct populations likely dispersed into temporary glacial lakes that, when receded, left populations in previously glaciated areas. Cambarus polychromatus possibly dispersed from southern refugia, while Cambarus sp. A cf. diogenes dispersed from southern refugia not sympatric with C. polychromatus. The glacial refugia included western and southern areas of the glacial maximum; however, northern dispersal routes may be important with global climate change.