BackgroundOysters are morphologically plastic and hence difficult subjects for taxonomic and evolutionary studies. It is long been suspected, based on the extraordinary species diversity observed, that Asia Pacific is the epicenter of oyster speciation. To understand the species diversity and its evolutionary history, we collected five Crassostrea species from Asia and sequenced their complete mitochondrial (mt) genomes in addition to two newly released Asian oysters (C. iredalei and Saccostrea mordax) for a comprehensive analysis.ResultsThe six Asian Crassostrea mt genomes ranged from 18,226 to 22,446 bp in size, and all coded for 39 genes (12 proteins, 2 rRNAs and 25 tRNAs) on the same strand. Their genomes contained a split of the rrnL gene and duplication of trnM, trnK and trnQ genes. They shared the same gene order that differed from an Atlantic sister species by as many as nine tRNA changes (6 transpositions and 3 duplications) and even differed significantly from S. mordax in protein-coding genes. Phylogenetic analysis indicates that the six Asian Crassostrea species emerged between 3 and 43 Myr ago, while the Atlantic species evolved 83 Myr ago.ConclusionsThe complete conservation of gene order in the six Asian Crassostrea species over 43 Myr is highly unusual given the remarkable rate of rearrangements in their sister species and other bivalves. It provides strong evidence for the recent speciation of the six Crassostrea species in Asia. It further indicates that changes in mt gene order may not be strictly a function of time but subject to other constraints that are presently not well understood.
The global gravity wave (GW) potential energy (PE) per unit mass is derived from SABER (Sounding of the Atmosphere using Broadband Emission Radiometry) temperature profiles over the past 14 years (2002–2015). Since the SABER data cover longer than one solar cycle, multivariate linear regression is applied to calculate the trend (means linear trend from 2002 to 2015) of global GW PE and the responses of global GW PE to solar activity, to QBO (quasi‐biennial oscillation) and to ENSO (El Niño–Southern Oscillation). We find a significant positive trend of GW PE at around 50°N during July from 2002 to 2015, in agreement with ground‐based radar observations at a similar latitude but from 1990 to 2010. Both the monthly and the deseasonalized trends of GW PE are significant near 50°S. Specifically, the deseasonalized trend of GW PE has a positive peak of 12–15% per decade at 40°S–50°S and below 60 km, which suggests that eddy diffusion is increasing in some places. A significant positive trend of GW PE near 50°S could be due to the strengthening of the polar stratospheric jets, as documented from Modern Era Retrospective‐analysis for Research and Applications wind data. The response of GW PE to solar activity is negative in the lower and middle latitudes. The response of GW PE to QBO (as indicated by 30 hPa zonal winds over the equator) is negative in the tropical upper stratosphere and extends to higher latitudes at higher altitudes. The response of GW PE to ENSO (as indicated by the Multivariate ENSO Index) is positive in the tropical upper stratosphere.
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