Few studies were made about zooplankton distribution in Jazan coastal area. The present study dealt with the identification of zooplankton at the sandy shore (AlSalwa coast) and mangrove muddy shore (Turfa peninsula) at the Almarjan coast. Species richness and population density at different seasons were determined for both study areas between May 2016-April 2017. Conductivity, pH, water temperature, and salinity were measured. The relationship between water characters and the seasonal abundance of zooplankton seasons was examined through regression analysis. Ciliates, Rotifers, Nauplius larva, Gammarus sp., Veliger larva, Nematodes, Planaria, Copepods, and Kinorhyncha were recorded for both study areas. The highest species richness and population density were recorded during the summer season for Almarjan sandy shore and Turfa peninsula mangrove. Ciliates were the most abundant zooplankton on the sandy shore, while Kinorhyncha was the least abundant. The zooplankton Nematode was the most abundant at the Turfa Peninsula mangrove, whereas Gnathostomulida was the least abundant. Conductivity, salinity, and water temperature showed a significant regression relationship (P<0.05) with zooplankton abundance. Data was discussed to highlight the role of zooplankton abundance in the mangrove and sandy shore ecosystem.