Mass
spectrometric data are copious and generate a processing burden
that is best dealt with programmatically. PythoMS is a collection
of tools based on the Python programming language that assist researchers
in creating figures and video output that is informative, clear, and
visually compelling. The PythoMS framework introduces a library of
classes and a variety of scripts that quickly perform time-consuming
tasks: making proprietary output readable; binning intensity vs time
data to simulate longer scan times (and hence reduce noise); calculating
theoretical isotope patterns and overlaying them in histogram form
on experimental data (an approach that works even for overlapping
signals); rendering videos that enable zooming into the baseline of
intensity vs time plots (useful to make sense of data collected over
a large dynamic range) or that depict the evolution of different species
in a time-lapse format; calculating aggregates; and providing a quick
first-pass at identifying fragments in MS/MS spectra. PythoMS is a
living project that will continue to evolve as additional scripts
are developed and deployed.
Understanding catalytic reactions is inherently difficult because not only is the catalyst the least abundant component in the mixture, but it also takes many different forms as the reaction proceeds....
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.