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Seasonal dynamics of heart rate variability in individuals of late summer and autumn generations have been studied in three rodent species kept in a vivarium: the striped field mouse (Apodemus agrarius), bank vole (Clethrionomys glareolus), and northern red backed vole (Cl. rutilus). It has been shown that the cardiac function of the rodents in autumn and winter is mainly controlled by autonomic mechanisms: the heart rate is slow, cardiovascular control systems are relaxed. During the winter-spring transition, the role of central cardiovascular circuits increases because of the necessity to activate all body systems by spring.