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Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013. A recent publication by Honsanan et al. in 2020 expanded information of families in Dothideomycetidae and Pleosporomycetidae with modern classifications. In this paper, we provide a refined updated document on orders and families incertae sedis of Dothideomycetes. Each family is provided with an updated description, notes, including figures to represent the morphology, a list of accepted genera, and economic and ecological significances. We also provide phylogenetic trees for each order. In this study, 31 orders which consist 50 families are assigned as orders incertae sedis in Dothideomycetes, and 41 families are treated as families incertae sedis due to lack of molecular or morphological evidence. The new order, Catinellales, and four new families, Catinellaceae, Morenoinaceae Neobuelliellaceae and Thyrinulaceae are introduced. Seven genera (Neobuelliella, Pseudomicrothyrium, Flagellostrigula, Swinscowia, Macroconstrictolumina, Pseudobogoriella, and Schummia) are introduced. Seven new species (Acrospermum urticae, Bogoriella complexoluminata, Dothiorella ostryae, Dyfrolomyces distoseptatus, Macroconstrictolumina megalateralis, Patellaria microspora, and Pseudomicrothyrium thailandicum) are introduced base on morphology and phylogeny, together with two new records/reports and five new collections from different families. Ninety new combinations are also provided in this paper.

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Three species of Graphis (Graphidaceae) are described from Mexico from two research stations of the Universidad Nacional Autónoma de México (UNAM): Chamela Biological Station in the Cuixmala-Chamela Biosphere Reserve, Jalisco, and Los Tuxtlas Tropical Biological Station in the Los Tuxtlas Biosphere Reserve, Veracruz. The new species Graphis bungartzii Barcenas-Peña, Lücking, Herrera-Campos & R. Miranda is characterized by erumpent lirellae with a lateral thalline margin, striate labia and laterally carbonized exciple, transversely septate ascospores, and norstictic and connorstictic acids. Graphis chamelensis Barcenas-Peña & Lücking has prominent lirellae with a basal to lateral thalline margin, entire labia and completely carbonized exciple, transversely septate ascospores, and norstictic acid. Finally, Graphis rosae-emiliae Barcenas-Peña & Lücking is characterized by erumpent lirellae with lateral thalline margin, striate labia and completely carbonized exciple, transversely septate ascospores, and no substances detected by TLC. We present updates to the world key to Graphis for 41 newly described or reinstated species since the world key was published in 2009. The following new combination is proposed: Pallidogramme parvicarpum (B. O. Sharma & Khadilkar) Lücking comb. nov., based on Graphis parvicarpa B. O. Sharma & Khadilkar.