Weather surveillance radars are increasingly used for monitoring the movements and abundances of animals in the airspace. However, analysis of weather radar data remains a specialised task that can be technically challenging. Major hurdles are the difficulty of accessing and visualising radar data on a software platform familiar to ecologists and biologists, processing the low‐level data into products that are biologically meaningful, and summarizing these results in standardized measures. To overcome these hurdles, we developed the open source R package bioRad, which provides a toolbox for accessing, visualizing and analyzing weather radar data for biological studies. It provides functionality to access low‐level radar data, process these data into meaningful biological information on animal speeds and directions at different altitudes in the atmosphere, visualize these biological extractions, and calculate further summary statistics. The package aims to standardize methods for extracting and reporting biological signals from weather radars. Here we describe a roadmap for analyzing weather radar data using bioRad. We also define weather radar equivalents for familiar measures used in the field of migration ecology, such as migration traffic rates, and recommend several good practices for reporting these measures. The bioRad package integrates with low‐level data from both the European radar network (OPERA) and the radar network of the United States (NEXRAD). bioRad aims to make weather radar studies in ecology easier and more reproducible, allowing for better inter‐comparability of studies.
Published as: Verhelst, P.; Buysse, D.; Reubens, J.; Pauwels, I.; Aelterman, B.; Van Hoey, S.; Goethals, P.; Coeck, J.; Moens, T.; Mouton, A. 2018. Downstream migration of European eel (Anguilla anguilla) in an anthropogenically regulated freshwater system: implications for management. Fisheries Research 199: 252 -262.For the supplemental material and appendices, we refer to the online version of the article: https://doi.
Downstream migration in a polder area
AbstractConnectivity between freshwater habitats and marine areas is heavily obstructed by anthropogenic structures (e.g. weirs, pumping stations, sluices...), leading to a high pressure on diadromous fish populations. A better understanding of fish migration behaviour in relation to these barriers is needed to take proper mitigation actions. We investigated the impact of migration barriers on downstream migrating European eel by tracking 50 acoustically tagged eels between July 2012 and March 2015 in a Belgian polder area. The study area was selected due to the presence of a wide range of migration barriers, such as two pumping stations, a weir and tidal sluices. These structures regulate the water level, resulting in discontinuous flow conditions. The results showed that migration was primarily nocturnal and discharge appeared to be the main trigger for migration in the polder. We also observed substantial delays and exploratory behaviour near barriers. Delays can have a serious impact on eels since their energy resources are limited for a successful trans-Atlantic migration. In addition, delays and exploratory behaviour can also increase predation and disease risk. The obtained knowledge can contribute to efficient management such as improved fish passage and guidance solutions.
Due to a recruitment decline of more than 90% in 30 years, the European eel (Anguilla anguilla L.) has been classified by IUCN as critically endangered. Although the species has been studied intensively to obtain knowledge to improve management, studies about the resident yellow stage are relatively scarce. In this study, 52 large female yellow eels were tagged with acoustic transmitters in a Belgian polder system and tracked by a network of 23 automatic listening stations. We studied both circadian and seasonal movement patterns and the effect of environmental variables on these patterns.Large female yellow eels were most active at night in late summer and early autumn.A generalised linear mixed model showed that their movement is only slightly influenced by environmental variables. Moreover, as yellow eels show high site fidelity (i.e., the majority was detected only in the habitat type of their catch-release location), they do not encounter many human-induced connectivity problems in polder systems, which makes these systems highly suitable as eel growth habitat. These results can contribute to an effective eel management regarding habitat protection and restoration.
K E Y W O R D Sacoustic telemetry, circadian, European eel, movement, movement range, seasonal
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