A four week laboratory experiment
was designed on the basis of
a modification of the Weiss–Cook reaction for the preparation
of cis-1,5-dimethylbicyclo[3.3.0]octane-3,7-dione.
In general, this very versatile organic reaction involves a two-step
process reacting biacetyl with 2 mol of dimethyl-1,3-acetonedicarboxylate
to form cis-bicycle([3.3.0]octane-3,7-dione). The
reaction employs an aldol reaction followed by successive Michael
reactions that are typically encountered near the end of a second-year
undergraduate organic chemistry course. The students gained hands-on
experience with 1H NMR and IR spectroscopy to analyze the
intermediate and final product. Students wrote a formal laboratory
report and discussed their results, including a proposal of the reaction
mechanism and calculation of the overall yield. The experiment may
be used in a traditional second semester organic chemistry laboratory
or an advanced organic chemistry synthesis course on multigram or
microscale levels.
performed a series of long molecular dynamics simulations for the SA or its mutants with/without biotin analog systems developed by kawato et al. to investigate the effect of mutations on the structural change, dynamics and the thermodynamic properties of the system. We also have calculated free energy of the systems using MPCAFEE method to evaluate binding affinity of artificial biotin analogs with SA mutants. We found that the mutations in the biotin-binding pocket affect not only the interaction with surrounding residues and with biotin analog, but also the tetramerization of the SA mutants.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.