The application of numerical technology for evaluation the correspondence of a mathematical model and experimental data via the balanced (optimization) identification method is demonstrated with comparing various models of pine transpiration. A quantitative measure of the model evaluation is the cross-validation error. Current implementation of the technology allow the researcher to formulate the computing task in a text file, which contains: mathematical model formulas (including differential and/or integration equations); declarations of parameters and/or functions to be identified; data source (with experimental measurements) and additional settings of the numerical method. As a result, the software package returns unknown parameters, functions, and modeling errors. This technology is successfully used to various models in biology, medicine, physics, etc.