We present results from our simulations of quantum chromodynamics (QCD) with four flavors of quarks: u, d, s, and c. These simulations are performed with a one-loop Symanzik improved gauge action, and the highly improved staggered quark (HISQ) action. We are generating gauge configurations with four values of the lattice spacing ranging from 0.06 fm to 0.15 fm, and three values of the light quark mass, including the value for which the Goldstone pion mass is equal to the physical pion mass. We discuss simulation algorithms, scale setting, taste symmetry breaking, and the autocorrelations of various quantities. We also present results for the topological susceptibility which demonstrate the improvement of the HISQ configurations relative to those generated earlier with the asqtad improved staggered action.

Neural activity patterns related to behavior occur at many scales in time and space from the atomic and molecular to the whole brain. Patterns form through interactions in both directions, so that the impact of transmitter molecule release can be analyzed upwardly through synapses, dendrites, neurons, populations and brain systems to behavior, and control of that release can be described step-wise through top-down transformations. Here we explore the feasibility of interpreting neurophysiological data in the context of many-body physics by using tools that physicists have devised to analyze comparable hierarchies in other fields of science. We focus on a mesoscopic level that offers a multi-step pathway between the microscopic functions of neurons and the macroscopic functions of brain systems revealed by hemodynamic imaging. We use electroencephalographic (EEG) records collected from high-density electrode arrays fixed on the epidural surfaces of primary sensory and limbic areas in rabbits and cats trained to discriminate conditioned stimuli (CS) in the various modalities. High temporal resolution of EEG signals with the Hilbert transform gives evidence for diverse intermittent spatial patterns of amplitude (AM) and phase modulations (PM) of carrier waves that repeatedly re-synchronize in the beta and gamma ranges at near zero time lags over long distances. The dominant mechanism for neural interactions by axodendritic synaptic transmission should impose distance-dependent delays on the EEG oscillations owing to finite propagation velocities. It does not. EEGs instead show evidence for anomalous dispersion: the existence in neural populations of a low velocity range of information and energy transfers, and a high velocity range of the spread of phase transitions. This distinction labels the phenomenon but does not explain it. In this report we explore the analysis of these phenomena using concepts of energy dissipation, the maintenance by cortex of multiple ground states corresponding to AM patterns, and the exclusive selection by spontaneous breakdown of symmetry (SBS) of single states in sequences.

High-density recording and log-log spectral display of EEG provide a foundation for holist studies of global human brain function, as an alternative to network approaches that decompose EEG into localized, modular signals for correlation and coherence.

Objective: To explain the neural mechanisms of spontaneous EEG by measuring the spatiotemporal patterns of synchrony among beta-gamma oscillations during perception. Methods: EEGs were measured from 8x8 (5.6x5.6 mm) arrays fixed on the surfaces of primary sensory areas in rabbits that were trained to discriminate visual, auditory or tactile conditioned stimuli (CSs) eliciting conditioned responses (CRs). EEG preprocessing was by (i) band pass filtering to extract the beta-gamma range (deleting theta-alpha); (ii) low-pass spatial filtering (not high-pass Laplacians used for localization), (iii) spatial averaging (not time averaging used for evoked potentials), and (iv) close spacing of 64 electrodes for simultaneous recording in each area (not sampling single signals from several areas); (v) novel algorithms were devised to measure synchrony and spatial pattern stability by calculating variances among patterns in 64-space derived from the 8x8 arrays (not by fitting equivalent dipoles). These methodological differences are crucial for the proposed new perspective on EEG. Results: Spatial patterns of beta-gamma EEG emerged following sudden jumps in cortical activity called "state transitions". Each transition began with an abrupt phase re-setting to a new value on every channel, followed sequentially by re-synchronization, spatial pattern stabilization, and a dramatic increase in pattern amplitude. State transitions recurred at varying intervals in the theta range. A novel parameter was devised to estimate the perceptual information in the betagamma EEG, which disclosed 2 to 4 patterns with high information content in the CS-CR interval on each trial; each began with a state transition and lasted ~.1 s. Conclusions:The function of each primary sensory neocortex was discontinuous; discrete spatial patterns occurred in frames like those in cinema. The frames before and after the CS-CR interval had low content. Significance: Derivation and interpretation of unit data in studies of perception might benefit from using multichannel EEG recordings to define distinctive epochs that are demarcated by state transitions of neocortical dynamics in the CS-CR intervals, particularly in consideration of the possibility that EEG may reveal recurring episodes of exchange and sharing of perceptual information among multiple sensory cortices. Simultaneously recorded, multichannel betagamma EEG might assist in the interpretation of images derived by fMRI, since high betagamma EEG amplitudes imply high rates of energy utilization. The spatial pattern intermittency provides a tag to distinguish gamma bursts from contaminating EMG activity in scalp recording in order to establish beta-gamma recording as a standard clinical tool. Finally, EEG cannot fail to have a major impact on brain theory.Background EEG analytic amplitude 3Walter J Freeman http://sulcus.berkeley.edu/wjf/EG_EEGPart1AnalyticAmplitude.pdf Cover Figure Legend:The EEG shows that neocortex processes information in frames like a cinema. The perceptual content is foun...

Objective: To explain spontaneous EEG through measurements of spatiotemporal patterns of phase among beta-gamma oscillations.Methods: High-density 8x8 intracranial arrays were fixed over sensory cortices of rabbits. EEGs were spatially low pass filtered, temporally band pass filtered and segmented in overlapping windows stepped at 2 ms. Phase was measured with the cosine as the temporal basis function, using both Fourier and Hilbert transforms to compensate for their respective limitations. Spatial patterns in 2-D phase surfaces were measured with the geometric form of the cone as the spatial basis function.Results: Two fundamental state variables were measured at each digitizing step in the 64 EEGs: the rate of change in phase with time (frequency) and the rate of change in phase with distance (gradient). The parameters of location, diameter, duration, and phase velocity of the cone of phase were derived from these two state variables. Parameter distributions including recurrence intervals extending into the low theta range were fractal; the mean values varied with window duration and interelectrode distance. Conclusions:The formation of spatial amplitude patterns began with phase transitions that were documented by phase discontinuities and phase cones. The multiplicity of overlapping cones indicated that sensory neocortices maintained a scale-free state of self-organized criticality (SOC) in each hemisphere as the basis for its rapid integration of sensory input with prior learning stored in cortical synaptic webs. Further evidence came from the fractal properties of the phase parameters and the self-similarity of phase patterns in the ms/mm to m/s ranges.Significance: These EEG data suggest that neocortical dynamics is analogous to the dynamics of self-stabilizing systems, such as a sand pile that maintains its critical angle by avalanches, and a pan of boiling water that maintains its critical temperature by bubbles that release heat. Betagamma oscillations stem from the ability of neocortex to maintain its stability under continuous sensory bombardment. Modeling implies that the critical parameter of neocortex (analogous to angle of repose or temperature) is the mean firing rates of neurons that are homeostatically regulated by refractory periods everywhere at all times in cortex. The advantage of SOC in perception may be the ability it gives neocortex to generate instantaneous global phase transitions (avalanches, bubbles) large enough to include the multiple sensory areas that are necessary to form Gestalts (multisensory percepts).Background EEG analytic phase 3Walter J Freeman