, a novel coronavirus that is related to severe acute respiratory syndrome coronavirus (SARS-CoV) and Middle East respiratory syndrome coronavirus (MERS-CoV) in phylogenetic distance was identified. 1 This virus, which was later designated as SARS-CoV-2, also causes acute respiratory disease syndrome (ARDS) termed coronavirus disease 2019 (COVID-19), which was declared as a pandemic by the World Health Organization in March 2020. Although the majority of patients of COVID-19 show moderate symptoms such as dry cough and fatigue, up to 20% cases develop severe symptoms characterized as ARDS, a clinical pulmonary phenomenon marked by the development of bilateral infiltrates and hypoxemia. 2 The median incubation period of SARS-CoV-2 infection is~4-5 days before symptom onset, and the majority of symptomatic patients develop symptoms within 11.5 days. Within 5-6 days of symptom onset, SARS-CoV-2 viral load reaches its peak, which is much earlier than SARS-CoV. 3 Severe COVID-19 cases progress to ARDS with hypoxemia around 8-12 days after symptom onset. 2 Although various independent factors such as older age and existing diseases contribute to mortality, the majority of fatal patients die of complications such as ARDS, myocardial injury, acute kidney injury, and sepsis. 2,3 The pathogenesis of COVID-19 has been heavily investigated in the past months. Pathophysiology in COVID-19 is characterized by diffuse alveolar damage, focal reactive hyperplasia of pneumocytes, inflammatory cellular infiltration, vasculitis, hypercoagulability, neutrophilia, and lymphopenia. 4 Studies have suggested that hyper-inflammation is linked to more severe disease of COVID-19, which is characterized by a cytokine releasing syndrome (CRS). 3,5 It has been reported that some inflammatory cytokines (such as IL-6, IL-10, and TNF-α) and chemokines (such as CXCL10/ IP-10, CCL2/MCP-1, and CCL3/MIP-1α) are upregulated in COVID-19 patients. 2 However, these studies are limited by the small sample size, narrowed cytokine and chemokine spectrum, and absence of temporal kinetic analysis of these factors with disease progression. Currently, limited information is available on host factors and biomarkers affecting individual outcomes in COVID-19. Identification of host plasma factors that are correlated to COVID-19 progression may provide potential biomarkers and targets for developing therapeutics. To systematically investigate the kinetic changes of plasma levels of cytokines, chemokines and growth factors (CCGFs) over the disease courses in COVID-19 patients as well as the correlations between the CCGF profiles and disease severity, we measured levels of 48 CCGFs in plasma of mild, severe and fatal COVID-19 patients collected at different stages of disease courses. We collected sera from 6 fatal, 7 severe, and 10 mild patients at day 1, 5, 10, and 14 after diagnosis. One sample was collected from each of the 4 healthy donors. We measured the levels of
The newly emerging coronavirus SARS-CoV-2 causes severe lung disease and substantial mortality. How the virus evades host defense for efficient replication is not fully understood. In this report, we found that the SARS-CoV-2 nucleocapsid protein (NP) impaired stress granule (SG) formation induced by viral RNA. SARS-CoV-2 NP associated with the protein kinase PKR after dsRNA stimulation. SARS-CoV-2 NP did not affect dsRNA-induced PKR oligomerization, but impaired dsRNA-induced PKR phosphorylation (a hallmark of its activation) as well as SG formation. SARS-CoV-2 NP also targeted the SG-nucleating protein G3BP1 and impaired G3BP1-mediated SG formation. Deficiency of PKR or G3BP1 impaired dsRNA-triggered SG formation and increased SARS-CoV-2 replication. The NP of SARS-CoV also targeted both PKR and G3BP1 to impair dsRNA-induced SG formation, whereas the NP of MERS-CoV targeted PKR, but not G3BP1 for the impairment. Our findings suggest that SARS-CoV-2 NP promotes viral replication by impairing formation of antiviral SGs, and reveal a conserved mechanism on evasion of host antiviral responses by highly pathogenic human betacoronaviruses.
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