An oceanographic survey was carried out in the Nador lagoon located on the Moroccan Mediterranean coast, in July 2012. The objective is to study the hydrological and sedimentary state of the lagoon after the establishment of the new pass, in 2011. The distribution of the physicochemical parameters of the environment allowed the identification of a spatial variability in relation to the general circulation in the lagoon and the presence of the treatment station on the continental shore. The sedimentary state also shows the intensity of the sea-lagoon exchange which is elevated in the center compared to the NO and SE extremities. Thus, maintaining the environmental balance of this ecosystem depends on the degree of sea-lagoon exchange and the control of the impact of anthropogenic activities.