Lung cancer is the leading cause of cancer death globally. The epidermal growth factor receptor (EGFR) plays an important role in cell proliferation and signaling. In this study, we examined the association between EGFR gene polymorphisms and lung cancer risk among the Jordanian population. A total of 129 patients with primary lung cancer and 129 matched healthy controls were recruited into this study. EGFR rs712829, rs712830, rs2072454, and rs11543848 single nucleotide polymorphisms (SNPs) were genotyped to test for their association with lung cancer risk. A significant association was observed between the rs712829 SNP and lung cancer risk (p < 0.05) where the GG + GT genotypes were higher in lung cancer patients when compared to controls. In addition, no association was detected between rs712830, rs2072454, and rs11543848 SNPs and lung cancer risk. When patients were stratified according to the lung cancer type, a significant association was detected between both rs712829 and rs2072454 and adenocarcinoma lung cancer (p < 0.05). Haplotype analysis of all four SNPs showed a significant association between the TCCG haplotype and both lung cancer and the adenocarcinoma subtype (p < 0.001). In conclusion, EGFR rs712829, rs2072454 SNPs, and TCCG haplotypes are associated with a risk of lung cancer among Jordanians. Since genetic associations are affected by the genetic background of populations, more studies in other Arab populations are required to confirm the present findings.
Support or Funding Information
The study was supported by funding provided by the Ministry of Higher Education—Scientific Research Fund (SRF) grant number JUST‐1‐2016.
Genotypes/Allele Pattern
Patients
Controls
p‐Value
For rs712829
GG
12 (28%)
29 (22%)
0.020
TT
4 (9%)
35 (27%)
GT
27 (63%)
65 (50%)
For rs712830
CC
41 (95%)
121 (94%)
0.670
CA
2 (5%)
8 (6%)
For rs2072454
CC
6 (14%)
15 (12%)
0.027
TT
26 (60%)
57 (44%)
CT
11 (26%)
57 (44%)
For rs11543848
AA
8 (19%)
26 (20%)
0.073
GG
2 (5%)
18 (14%)
GA
33 (77%)
85 (66%)Note: Rs29: rs712829, Rs30: rs712830, Rs54: rs2072454 and Rs48: rs11543848.
Haplotype
Rs29
Rs30
Rs54
Rs48
Frequency
Odd Ratio (95% CI)
p‐Value
1
T
C
T
A
0.2118
1.00
—
2
G
C
T
A
0.1748
1.00 (0.31–3.24)
1
3
G
C
T
G
0.1552
0.93 (0.34–2.55)
0.9
4
T
C
T
G
0.1228
1.38 (0.32–5.96)
0.66
5
G
C
C
G
0.0953
1.08 (0.31–3.67)
0.91
6
T
C
C
A
0.0794
1.46 (0.33–6.43)
0.62
7
G
C
C
A
0.0681
0.69 (0.15–3.15)
0.63
8
T
C
C
G
0.0629
168,507 (168,498–168,517)
<0.001
9
G
A
T
G
0.0156
0.71 (0.08–6.39)
0.76Note: Rs29: rs712829, Rs30: rs712830, Rs54: rs2072454 and Rs48: rs11543848.