We present a strategy to identify developmental/differentiation and
plasma membrane marker genes of the most primitive human Mesenchymal
Stem Cells (hMSCs). Using sensitive and quantitative TaqMan Low
Density Arrays (TLDA) methodology, we compared the expression of 381
genes in human Embryonic Stem Cells (hESCs), hESC-derived MSCs
(hES-MSCs), and hMSCs. Analysis of differentiation genes indicated
that hES-MSCs express the sarcomeric muscle lineage in addition to the
classical mesenchymal lineages, suggesting they are more primitive
than hMSCs. Transcript analysis of membrane antigens suggests that IL1R1low, BMPR1Blow, FLT4low, LRRC32low, and CD34 may be good candidates for the detection and
isolation of the most primitive hMSCs. The expression in hMSCs of
cytokine genes, such as IL6, IL8, or FLT3LG, without expression of the
corresponding receptor, suggests a role for these cytokines in the
paracrine control of stem cell niches. Our database may be shared with
other laboratories in order to explore the considerable clinical
potential of hES-MSCs, which appear to represent an intermediate
developmental stage between hESCs and hMSCs.