An AFLP-markers based genetic linkage map of Heterobasidion annosum locating intersterility genes

Lind, Mårten; Olson, Åke; Stenlid, Jan

doi:10.1016/j.fgb.2005.03.005

Cited by 31 publications

(43 citation statements)

References 41 publications

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“…Hybridization of closely related fungal species, such as mating population E and H forming the basis of this study, has been documented in other fungi (Lind et al, 2005) as well as within the Liseola section of Fusarium Desjardins et al, 1997] and [Leslie et al, 2004b]). …”

Section: Introductionmentioning

confidence: 80%

“…[Larraya et al, 2000] and [Lind et al, 2005]) as well as in other ascomycetes (e.g. [Xu and Leslie, 1996], [Leslie et al, 2004b] and [Gale et al, 2005]).…”

Section: Discussionmentioning

confidence: 99%

“…[Xu and Leslie, 1996], [Leslie et al, 2004b] and [Gale et al, 2005]). The authors of these studies have hypothesized that the distortion could be attributed to several factors such as bias in the collection of spores used for the mapping population ( [Larraya et al, 2000] and [Lind et al, 2005]), error in scoring (Xu and Leslie, 1996), differential viability of certain ascospores (Xu and Leslie, 1996), or to structural rearrangements of chromosomes that may have caused distorted segregation patterns (Gale et al, 2005).…”

Section: Discussionmentioning

confidence: 99%

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Complete genetic linkage maps from an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Vos

Myburg

Wingfield

et al. 2007

Fungal Genetics and Biology

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The Gibberella fujikuroi complex includes many plant pathogens of agricultural crops and trees, all of which have anamorphs assigned to the genus Fusarium. In this study, an interspecific hybrid cross between Gibberella circinata and Gibberella subglutinans was used to compile a genetic linkage map. A framework map was constructed using a total of 578 AFLP markers together with the mating type (MAT-1 and MAT-2) genes and the histone (H3) gene. Twelve major linkage groups were identified (n = 12). Fifty percent of the markers showed significant deviation from the expected 1:1 transmission ratio in a haploid F 1 cross (P < 0.05). The transmission of the markers on the linkage map was biased towards alleles of the G. subglutinans parent, with an estimated 60% of the genome of F 1 individuals contributed by this parent. This map will serve as a powerful o op pe en nU UP P ( (J Ju ul ly y 2 20 00 07 7) ) tool to study the genetic architecture of interspecific differentiation and pathogenicity in the two parental genomes.

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Section: Introductionmentioning

confidence: 80%

“…[Larraya et al, 2000] and [Lind et al, 2005]) as well as in other ascomycetes (e.g. [Xu and Leslie, 1996], [Leslie et al, 2004b] and [Gale et al, 2005]).…”

Section: Discussionmentioning

confidence: 99%

Section: Discussionmentioning

confidence: 99%

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Complete genetic linkage maps from an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Vos

Myburg

Wingfield

et al. 2007

Fungal Genetics and Biology

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show abstract

“…AFLP marker clustering has been referred to in the reports of various species (e.g., Arabidopsis [1] and oyster [56]), including a basidiomycete (Heterobasidion annosum [24]). Also, clustering has been found to be around the centromere regions (1,56).…”

Section: Discussionmentioning

confidence: 99%

Construction of a Genetic Linkage Map Based on Amplified Fragment Length Polymorphism Markers and Development of Sequence-Tagged Site Markers for Marker-Assisted Selection of the Sporeless Trait in the Oyster Mushroom (Pleurotus eryngii)

Okuda

Ueda

Obatake³

et al. 2012

Appl Environ Microbiol

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A large number of spores from fruiting bodies can lead to allergic reactions and other problems during the cultivation of edible mushrooms, including Pleurotus eryngii (DC.) Quél. A cultivar harboring a sporulation-deficient (sporeless) mutation would be useful for preventing these problems, but traditional breeding requires extensive time and labor. In this study, using a sporeless P. eryngii strain, we constructed a genetic linkage map to introduce a molecular breeding program like marker-assisted selection. Based on the segregation of 294 amplified fragment length polymorphism markers, two mating type factors, and the sporeless trait, the linkage map consisted of 11 linkage groups with a total length of 837.2 centimorgans (cM). The gene region responsible for the sporeless trait was located in linkage group IX with 32 amplified fragment length polymorphism markers and the B mating type factor. We also identified eight markers closely linked (within 1.2 cM) to the sporeless locus using bulked-segregant analysis-based amplified fragment length polymorphism. One such amplified fragment length polymorphism marker was converted into two sequence-tagged site markers, SD488-I and SD488-II. Using 14 wild isolates, sequence-tagged site analysis indicated the potential usefulness of the combination of two sequence-tagged site markers in cross-breeding of the sporeless strain. It also suggested that a map constructed for P. eryngii has adequate accuracy for marker-assisted selection.

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“…Genetic linkage analyses of this fungus had produced maps with 19 large linkage groups and 20 smaller ones (Lind et al, 2005), but the precise chromosome number for this species has not been conclusively determined. The v2.0 of the homokaryotic H. annosum genome assembly consists of 33.1 Mbp sequence assembled into 15 scaffolds at least 10 of which represent nearly complete chromosomes (http://genome.jgipsf.org/Hetan2/Hetan2.home.html).…”

Section: Analysis Of the Telomere Regions Of Heterobasidion Annosummentioning

confidence: 99%

Basidiomycetes Telomeres – A Bioinformatics Approach

Ramı́rez¹,

Pérez²,

Castanera³

et al. 2011

Bioinformatics - Trends and Methodologies

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An AFLP-markers based genetic linkage map of Heterobasidion annosum locating intersterility genes

Cited by 31 publications

References 41 publications

Complete genetic linkage maps from an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Complete genetic linkage maps from an interspecific cross between Fusarium circinatum and Fusarium subglutinans

Construction of a Genetic Linkage Map Based on Amplified Fragment Length Polymorphism Markers and Development of Sequence-Tagged Site Markers for Marker-Assisted Selection of the Sporeless Trait in the Oyster Mushroom (Pleurotus eryngii)

Basidiomycetes Telomeres – A Bioinformatics Approach

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