2024
DOI: 10.1101/2024.05.31.596898
|View full text |Cite
Preprint
|
Sign up to set email alerts
|

ARTEM: a method for RNA and DNA tertiary motif identification with backbone permutations, and its example application to kink-turn-like motifs

Eugene F. Baulin,
Davyd R. Bohdan,
Dawid Kowalski
et al.

Abstract: The functions of non-coding RNAs are largely defined by their three-dimensional structures. RNA 3D structure is organized hierarchically and consists of recurrent building blocks called tertiary motifs. The computational problem of RNA tertiary motif search remains largely unsolved, as standard approaches are restrained by sequence, interaction network, or backbone topology. We developed the ARTEM superposition algorithm, which is free from these limitations. Here, we present a version of ARTEM that allows aut… Show more

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...

Citation Types

0
0
0

Publication Types

Select...

Relationship

0
0

Authors

Journals

citations
Cited by 0 publications
references
References 63 publications
(128 reference statements)
0
0
0
Order By: Relevance

No citations

Set email alert for when this publication receives citations?