Studying not only individual students indicators of students, but complex intersystem interactions that reflect the specifics of adaptive capabilities is of scientific interest. The aim of the study. To reveal the features of intersystem interactions of indicators of the blood vessels functional state, morphological and neurodynamic characteristics of students with different types of autonomic regulation, living in the KhantyMansiysk Autonomous Okrug – Yugra. Methods. 429 first–fourth-year students (348 girls, 80 boys) of the Surgut State Pedagogical University were examined. The initial type of autonomic regulation was determined by the average duration of electrocardiogram RR intervals. Anthropometry parameters (body length and weight) and body composition were assessed using Tanita BC-601 device (Tanita, Japan), vascular wall elasticity – using AngioScan-01 (AngioScan-Electronics Ltd, Russia), neurodynamic indicators – using NS-PsychoTest device (Neurosoft, Russia). Statistical analysis was carried out using Statistica 7.0 software (StatSoft Inc., USA). We used the nonparametric Mann – Whitney U-test to evaluate differences and the nonparametric Pearson R-test to analyze correlations. Results. An increase in the stiffness of the vascular wall of large and small arteries in girls is accompanied by an increase in parasympathetic activity. In young men, an increase in the stiffness of large arteries raises with an increase in sympathoadrenal activity, while a compensatory increase in the stiffness of small muscular arteries is noted with an increase in parasympathetic activity. In persons with the sympathicotonic type of autonomic regulation, an excess content of fat mass, an increased frequency of visceral obesity, and a deficiency in water content were registered. With the predominance of the parasympathetic component contribution to the regulation of cardiac rhythm, an increase in the processes of inhibition in the central nervous system was noted. In young men, reduced sensorimotor reactions are consistent with sympathetic activation in the regulation of heart rate. Correlation analysis made it possible to establish some features in the interaction of the vascular, morphological and central nervous systems. Conclusion. Differences in indicators of functional systems (physical development, blood flow, neurodynamic characteristics) in the examined groups of students are shown, taking into account gender and autonomic regulation type. Features of intersystem interactions of indicators of physiological systems of students’ bodies with different types of autonomic regulation were revealed.