Biobanking IT Systems, Database Structure and Web Applications

Mitchell, Christine; Gramatiuk, Svetlana; Sarkisian, Tamara; Kozlakidis, Zisis; Sargsyan, Karine

doi:10.1007/978-3-030-87637-1_12

Cited by 1 publication

(1 citation statement)

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“…Сбор и архивирование информации, полученной в результате проведения аналитических исследований с использованием биологического материала, также требует инфраструктуры информационного сопровождения [3]. Благодаря широкому использованию новых технологических платформ увеличилось количество результатов "омикс"-исследований, что требует модернизации систем управления биобанками и их функциональной совместимости для последующих исследований [4]. В настоящее время процессы научно-исследовательской деятельности подвергаются влиянию глубоких трансформаций, обусловленных развитием информационных технологий.…”

Section: Introductionunclassified

BioVitrina web repository — access to data on bioresource collections

Bukreeva,

Malsagova,

Izotov

et al. 2023

Cardiovasc Ther Prev

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Aim. To develop the BioVitrina web repository for visualizing data on biological samples available in the organization (https://bb.ibmc.msk.ru).Material and methods. The following set of tools was used: PostgreSQL 12, Python 3.8 scripting language, Django 3.2.7, Angular 12.2.13, Nginx, Docker 3, Redis 6.Results. Biological samples are systematized according to the International Classification of Diseases, 10th revision (ICD-10). After selecting the most suitable biosamples, the User has the opportunity to submit a request for their receipt. A necessary condition for obtaining biological samples is the subsequent publication of the results of experimental studies in the BioVitrina web repository. Such an exchange of analytical research results will avoid repetition of similar studies and will contribute to the conservation of material resources.Conclusion. "BioVitrina" was developed to optimize the infrastructure of biobanks of organizations and ensure the availability of information about their existing bioresource collections. This will solve many issues related to the use of different types of biomaterials, both for research and clinical purposes in personalized biomedicine.

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Section: Introductionunclassified