Arachidonic acid (C20:4 ⌬ 5,8,11,14 ) is a polyunsaturated fatty acid synthesized by the ⌬ 5 -fatty acid desaturation of di-homo-␥-linolenic acid (C20:3 ⌬ 8,11,14 ). In mammals, it is known to be a precursor of the prostaglandins and the leukotrienes but it is also accumulated by the filamentous fungus Mortierella alpina. We have isolated a cDNA encoding the ⌬ 5 -fatty acid desaturase from M. alpina via a polymerase chain reaction-based strategy using primers designed to the conserved histidine box regions of microsomal desaturases, and confirmed its function by expression in the yeast Saccharomyces cerevisiae. Analysis of the lipids from the transformed yeast demonstrated the accumulation of arachidonic acid. The M. alpina ⌬ 5 -desaturase is the first example of a cloned ⌬ 5 -desaturase, and differs from other fungal desaturases previously characterized by the presence of an N-terminal domain related to cytochrome b 5 .The filamentous fungus M. alpina is unusual in that it can produce a wide range of polyunsaturated fatty acids. It differs from higher plants in its fatty acid unsaturation as it is able to produce arachidonic acid (C20: 4 ⌬ 5,8,11,14 ) and eicosapentaenoic acid (C20: 5 ⌬ 5,8,11,14,17 ) (1). In filamentous fungi, polyunsaturated fatty acids are present both in the phospholipids and the triacylglycerols, indicating that they have a role in membrane structure and as storage oils (2). In animals, arachidonic acid is a precursor of the short-lived regulatory molecules, the eicosanoids, which comprise the prostaglandins, the leukotrienes, and the thromboxanes (3). All mammalian cells except erythrocytes synthesize eicosanoids, and among their many functions they are involved in inflammatory response, reproductive function, and regulation of blood pressure (4).In fungi, unsaturated fatty acids are formed in the endoplasmic reticulum by the action of integral membrane-bound fattyacid desaturase enzymes, which sequentially insert double bonds into the acyl chain (5, 6). The ⌬ 5 -desaturase is responsible for the conversion of di-homo-␥-linolenic acid (C20:3 ⌬ 8,11,14 ) to arachidonic acid. It is thought to function like the other microsomal desaturases from higher plants and yeast, catalyzing aerobic reactions requiring cytochrome b 5 as a cofactor. Electrons are transferred from NADH-dependent cytochrome b 5 reductase, via the heme-containing cytochrome b 5 molecule to the fatty acid desaturase (7,8).Biochemical characterization of membrane-bound desaturases has been limited because they are difficult to purify due to their hydrophobic nature. Hence, molecular genetic approaches, particularly the use of Arabidopsis mutants, have provided much information on desaturation reactions (9, 10). Analysis of the predicted protein sequences for the higher plant desaturases together with those from cyanobacteria, yeast, and mammals revealed the presence of eight highly conserved histidine residues (11). Mutagenesis studies on the microsomal ⌬ 9 -desaturase from rat and the ⌬ 12 -desaturase from Synechocystis ...