Cohnella collisoli sp. nov., isolated from lava forest soil

Lee, Keun Chul; Kim, Kwang Kyu; Kim, Jong‐Shik; Kim, Dae-Shin; Ko, Suk-Hyung; Yang, Seung‐Hoon; Lee, Jung-Sook

doi:10.1099/ijsem.0.000388

Cited by 17 publications

(6 citation statements)

References 35 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Considering that the proposed and generally accepted species boundaries are 95-96 % (ANI and AAI) and 70 % (dDDH), respectively [34,35], strain MFER-1 T was supposed to be a novel taxon clearly distinguishable from those species. Data from: *Jiang et al [42]; †Jiang et al [41]; ‡Kim et al [45]; §Lee et al [43]; ¶Meng et al [9]; **Caiet al [40]; † †Flores-Félix et al [8]; ‡ ‡Garcia-Fraileet al [3].…”

Section: Genomic Featuresmentioning

confidence: 99%

“…This profile is generally in agreement with the characteristics of Cohnella species [2], containing diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine as the major polar lipids. In the case of strain MFER-1 T , lysylphosphatidylglycerol was not detected while it was present in the closely related species of the genus Cohnella and the type species Cohnella thermotolerans [2,9,[40][41][42][43]. The lack of lysylphosphatidylglycerol was also shown in C. lupini RLAHU4B T and C. phaseoli GSPC1 T [3,8].…”

Section: Chemotaxonomymentioning

confidence: 99%

See 1 more Smart Citation

Cohnella herbarum sp. nov., isolated from wild grass fermentation broth

Won

Lee

Hong

et al. 2022

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

A novel strictly aerobic, Gram-stain-positive, rod-shaped, motile, endospore-forming, white-coloured bacterium, designated strain MFER-1T, was isolated from a fermented liquor of wild grasses sampled in the Republic of Korea. The respiratory quinone of strain MFER-1T was menaquinone-7 and its major cellular fatty acids were anteiso-C15 : 0 (55.3 %), iso-C16 : 0 (17.5 %) and C16 : 0 (12.1 %). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, four unidentified aminophospholipids and an unidentified phospholipid. The 16S rRNA gene sequence of strain MFER-1T showed similarity of 98.1 % to ‘Cohnella cholangitidis’ 1 605-214T and below 98.0 % sequence similarity to the other Cohnella species. The phylogenomic tree indicated that strain MFER-1T formed a reliable cluster with several Cohnella species. The estimated genome size of strain MFER-1T was 8.52 Mb. Genomic DNA G+C content was 50.7mol%. The orthologous average nucleotide identity, digital DNA–DNA hybridization and amino acid identity values of strain MFER-1T with the most closely related species ‘Cohnella cholangitidis’ 1 605-214T were 78.7, 23.0 and 79.6 %, respectively. Based on the phenotypic, chemotaxonomic and phylogenetic results, strain MFER-1T should represent a novel species of the genus Cohnella , for which the name Cohnella herbarum sp. nov. is proposed, with strain MFER-1T (=KACC 21 257T=NBRC 114 628T) as the type strain.

show abstract

Section: Genomic Featuresmentioning

confidence: 99%

Section: Chemotaxonomymentioning

confidence: 99%

Cohnella herbarum sp. nov., isolated from wild grass fermentation broth

Won

Lee

Hong

et al. 2022

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

show abstract

“…The genus Cohnella currently consists of 38 species with validly published names and proposed names (www.bacterio.net/genus/Cohnella). Members of this genus are distributed among a wide variety of soil [3–14] and freshwater habitats [15, 16], along with blood culture [1, 17] and the rhizosphere [18, 19]. Despite belonging to the same genus of Cohnella , each species shows distinct characteristics.…”

Section: Full-textmentioning

confidence: 99%

Cohnella terricola sp. nov., isolated from soil

Kim

Chhetri

Kim

et al. 2021

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

A Gram-positive, aerobic, flagellated, endospore-forming, rod-shaped strain, designated as G13T, was isolated from soil. The results of 16S rRNA gene sequence analysis led to the conclusion that strain G13T was phylogenetically related to Cohnella boryungensis BR29T (97.5 %) and Cohnella phaseoli CECT 7287T (96.9 %) with digital DNA–DNA hybridization values of 21.0 and 21.4 %, and distantly related to Cohnella thermotolerans CCUG 47242T (94.8 %), type species of the genus Cohnella , at 19.0 %. The genome size of strain G13T was 5 387 258 bp, with 51.3 mol% G+C content. The predominant fatty acids were summed feature 9 (iso-C17 : 1 ω9c and/or C16 : 0 10-methyl), anteiso-C17 : 0, iso-C17 : 0 and iso-C15 : 0. The predominant quinone was menaquinone-7 and the major polar lipids were diphosphatidyglycerol, phosphatidylethanolamine, phosphatidylglycerol, lysylphosphatidylglycerol, three aminophospholipids, two phosphoglycolipids, three aminolipids and two unidentified lipids. Based on the data from phenotypic tests and the genotypic differences between strain G13T and its close phylogenetic relatives, strain G13T represents a new species belonging to the genus Cohnella , for which the name Cohnella terricola sp. nov. (=KACC 19905T=NBRC 113748T) is proposed.

show abstract

“…Species of the genus contain phosphatidylethanolamine (PE), phosphatidylglycerol (PG), diphosphatidylglycerol (DPG) and other unknown lipids as polar lipids, and contain menaquinone 7 (MK-7) as the respiratory quinone. Members of the genus Cohnella have been isolated from various habitats, including soil [2–12], water [13], rhizosphere or root nodules [14–17], animal excrement [18], green alga [19], coolant lubricant solution [20] and Siberian permaforst [21], which indicated species in this genus can be retrieved from various habitats.…”

Section: Full-textmentioning

confidence: 99%