Comparative mitochondrial genome analysis of Grammodes geometrica and other noctuid insects reveals conserved mitochondrial genome organization and phylogeny

Huang, Yan; Yu, Li; Zhu, Xiaoyu; Xin, Zhao-Zhe; Zhang, Huabin; Zhang, Dai-Zhen; Wang, Jialian; Tang, Boping; Zhou, Chun-Lin; Liu, Qiu-Ning; Dai, Li-Shang

doi:10.1016/j.ijbiomac.2018.09.104

Cited by 31 publications

(16 citation statements)

References 63 publications

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“…These genes were between 159 bp (atp8) and 1713 bp (nad5) in length. This is consistent with findings from other Lepidopteran species in which these two mitogenes are often the shortest and longest, respectively 11,13 . All detected PCGs began with an ATN codon (2 ATA, 3 ATT, and 8 ATG).…”

Section: Resultssupporting

confidence: 92%

Organization and phylogenetic relationships of the mitochondrial genomes of Speiredonia retorta and other lepidopteran insects

Sun

Huang

Liu

et al. 2021

Sci Rep

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In this study, we analyzed the complete mitochondrial genome (mitogenome) of Speiredonia retorta, which is a pest and a member of the Lepidoptera order. In total, the S. retorta mitogenome was found to contain 15,652 base pairs encoding 13 protein-coding genes (PCGs), 22 tRNAs, 2 rRNAs, as well as an adenine (A) + thymine (T)-rich region. These findings were consistent with the mitogenome composition of other lepidopterans, as we identified all 13 PCGs beginning at ATN codons. We also found that 11 PCGs terminated with canonical stop codons, whereas cox2 and nad4 exhibited incomplete termination codons. By analyzing the mitogenome of S. retorta using Bayesian inference (BI) and maximum likelihood (ML) models, we were able to further confirm that this species is a member of the Erebidae family.

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Section: Resultssupporting

confidence: 92%

Organization and phylogenetic relationships of the mitochondrial genomes of Speiredonia retorta and other lepidopteran insects

Sun

Huang

Liu

et al. 2021

Sci Rep

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“…Thirteen PCGs were identified, with a total length of 11,100 bp and distributed from 159 bp (atp8) to 1,713 bp (nad5). The shortest and longest PCGs are generally consistent with those found in other insects (Huang et al 2019;Sun et al 2021). Six types of start codons (ATA, TTG, ATA, ATG, ATT, and GTG) and three stop codons (TAA, TAG, T(AA)) were identified in PCGs.…”

supporting

confidence: 83%

The complete mitochondrial genome of Poecilocoris druraei (Linnaeus, 1771) (Hemiptera: Scutelleridae) and its phylogenetic implications

Liu

Zhuo

Fang

et al. 2021

Mitochondrial DNA Part B

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“…MN495624), containing the typical set of 13 protein-coding, 2 rRNA, and 22 tRNA genes, and 1 non-coding AT-rich region. Gene order was conserved and identical to most other previously sequenced Noctuidae (Timmermans et al 2014;Li et al 2015;Yao et al 2018;Huang et al 2019). The nucleotide composition of the mitogenome was biased toward A and T, with 80.9% of A þ T content (A 39.6%, T 41.3%, C 11.3%, G 7.8%).…”

mentioning

confidence: 52%

Characterisation and phylogenetic analysis of the complete mitochondrial genome of Ctenoplusia albostriata (Lepidoptera: Noctuidae: Plusiinae)

Xue

Zhang

Gao

et al. 2019

Mitochondrial DNA Part B

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Ctenoplusia albostriata is a pest of composite plants such as Calendula officinalis L. and Dahlia pinnata. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of C. albostriata. This mitogenome was 15,284 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and 2 ribosomal RNA unit genes (rRNAs). Gene order was conserved and was found to be identical to most other previously sequenced Noctuidae. The whole mitogenome exhibited heavy AT nucleotide bias (80.9%). Except for cox1 started with CGA, all other PCGs started with the standard ATN codons. Most of the PCGs terminated with the stop codon TAA, whereas cox1, cox2 and nad4 end with the incomplete codon T-. Phylogenetic analysis showed that the mitogenome of C. albostriata was similar to C. agnata and C. limbirena, and the subfamily Plusiinae was close to Acronictinae, Heliothinae, Amphipyrinae, Noctuinae, and Hadeninae.

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Comparative mitochondrial genome analysis of Grammodes geometrica and other noctuid insects reveals conserved mitochondrial genome organization and phylogeny

Cited by 31 publications

References 63 publications

Organization and phylogenetic relationships of the mitochondrial genomes of Speiredonia retorta and other lepidopteran insects

Organization and phylogenetic relationships of the mitochondrial genomes of Speiredonia retorta and other lepidopteran insects

The complete mitochondrial genome of Poecilocoris druraei (Linnaeus, 1771) (Hemiptera: Scutelleridae) and its phylogenetic implications

Characterisation and phylogenetic analysis of the complete mitochondrial genome of Ctenoplusia albostriata (Lepidoptera: Noctuidae: Plusiinae)

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