In this article, the output tracking of Boolean control networks with impulsive effects (BCNs-IE) is discussed. Based on structure matrices of BCNs-IE and controllability matrices with respect to state subsets, stable complex attractors are studied. By constructing an auxiliary BCN-IE and using stable complex attractors, a necessary and sufficient condition for the output tracking problem is proposed. In addition, an algorithm to design state feedback controllers for the output tracking problem is provided. Moreover, an example is given to show the validity of the obtained results. INDEX TERMS Boolean control network, impulsive effect, output tracking, stable complex attractor, state feedback controller.