Dataset for diseases associated with exposure to broflanilide, a novel pesticide, in larval zebrafish (Danio rerio)

Patuel, Sarah J.; English, Cole; Lopez-Scarim, Victoria; Konig, Isaac; Souders, Christopher L.; Ivantsova, Emma; Martyniuk, Christopher J.

doi:10.1016/j.dib.2023.109534

Cited by 1 publication

(1 citation statement)

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“…We used clusterprofiler for the KEGG enrichment analysis and the KEGG pathway of annotated differential genes to calculate the gene list and gene number for each pathway. We used the main biological functions performed by the differential genes to identify the KEGG pathways with significant enrichment of differential genes compared with the whole genome (p ≤ 0.05) [53].…”

Section: Transcriptome Analysis Of T Camphoratus Myceliamentioning

confidence: 99%

Cymbopogon citratus Water Extract and Methyl Jasmonate Improve Polyunsaturated Fatty Acid Metabolism in Taiwanofungus camphoratus Mycelia

Wen,

Lin,

Lin

et al. 2024

Separations

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A rare medicinal fungus called Taiwanofungus camphoratus gives people resistance to illness. In order to effectively obtain high−quality T. camphoratus mycelia, we added Cymbopogon citratus (lemongrass) water extract (LWE), which was prepared using hot water and dry lemongrass leaves and methyl jasmonate (MJ) as an additive, in order to cultivate T. camphoratus mycelia. The components of LWE were identified by gas chromatography–mass spectrometry as glucose (61.66%) and galactose (17.10%). Compare to the basal medium, 0.5–2.5 g·L−1 LWE and 5–25 μmol·L−1 MJ can enhance the proliferation of mycelia and the metabolism of polyunsaturated fatty acids (PUFAs). Among them, the T. camphoratus mycelia growth rate increased to 1.292 ± 0.01 cm·d−1 and 1.285 ± 0.05 cm·d−1, improving by 2.5 g·L−1 LWE and 25 μmol·L−1 MJ, respectively. PUFAs are mainly composed of linoleic acid (LA) and oleic acid (OA). The contents of LA and OA were 0.28 ± 0.02 mg·g−1 and 0.23 ± 0.05 mg·g−1 after MJ treatment, while the contents of LA and OA were 0.08 ± 0.03 mg·g−1 and 0.05 ± 0.05 mg·g−1 after LWE treatment. Transcriptome analyses revealed that 367 and 232 genes within MJ and LWE treatment were significantly different from the basal medium. Out of 13 unigenes, FAD2−2, SCD, and FAD2−1 had the highest expression levels according to the quantitative RT−PCR result. The bioinformatics analysis showed that three genes are closely related to the M8 chromosome of T. camphoratus, and they are hydrophobic transmembrane proteins. The identification and investigation of fatty acid genes in T. camphoratus mycelia will be improved by our findings.

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Section: Transcriptome Analysis Of T Camphoratus Myceliamentioning

confidence: 99%