Deeper insight into the origin and spread of European common carp (Cyprinus carpio carpio) based on mitochondrial D-loop sequence polymorphisms

Kohlmann, Klaus; Kersten, Petra

doi:10.1016/j.aquaculture.2012.11.006

Cited by 23 publications

(15 citation statements)

References 34 publications

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“…All of these studies indicate that all common carp populations belong to the European and East Asian subspecies. Genetic differentiation into the two subspecies of Cyprinus carpio carpio in Europe and Cyprinus carpio haematopterus in East Asia is clearly evident, and the existence of a third subspecies (C. carpio rubrofuscus) that may have diverged from C. carpio haematopterus in China has been suggested (Kohlmann and Kersten 2013;Zhou et al 2004a). However, many phylogenetic relationships and the breeding history remain uncertain in common carp.…”

Section: Introductionmentioning

confidence: 95%

“…However, only partial mtDNA sequences were used in most studies because of budget and technology concerns. The cytochrome c oxidase subunit II, cytochrome b (Cyt b), and the displacement loop (D-loop) regions are the most commonly used sequences for phylogenetic analyses (Kohlmann and Kersten 2013;Zhou et al 2004b). However, different genes and regions in the mitogenome have various evolutionary rates, which may generate significant differences during phylogenetic analyses.…”

Section: Introductionmentioning

confidence: 99%

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Phylogeny and Evolution of Multiple Common Carp (Cyprinus carpio L.) Populations Clarified by Phylogenetic Analysis Based on Complete Mitochondrial Genomes

Dong

Wang

et al. 2015

Mar Biotechnol

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Common carp (Cyprinus carpio L.) is one of the oldest, most widely farmed commercially important freshwater fish in the world. However, many undetermined phylogenetic relationships and origins of common carp lineages remain, which are obstacles to conservation and genetic breeding of this species. Phylogenetic analyses based on molecular tools are helpful to distinguish the origin of species, understand and clarify their evolutionary history, and provide a genetic basis for selective breeding. In this study, we demonstrated a method to extract complete mitochondrial genome sequences from whole-genome resequencing data using the Illumina platform. The complete mitochondrial genome sequences of 26 individuals representing nine strains were obtained and subjected to a phylogenetic analysis. We reconstructed the phylogenetic topologies of the nine strains and analyzed the haplotypes. Results from both analyses suggested that the genome sequences belonged to two distinct subspecies from Europe and East Asia. We also estimated the time of divergence of the nine strains, which was up to 100 KYA. The phylogenetic results clarified the breeding history of Songpu mirror carp and suggest that this species may be hybrid of paternal European mirror carp and maternal Xingguo red carp. The results also support a previous hypothesis that koi may have originated from or have close ancestry with Oujiang color carp in China.

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Section: Introductionmentioning

confidence: 95%

Section: Introductionmentioning

confidence: 99%

Phylogeny and Evolution of Multiple Common Carp (Cyprinus carpio L.) Populations Clarified by Phylogenetic Analysis Based on Complete Mitochondrial Genomes

Dong

Wang

et al. 2015

Mar Biotechnol

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“…The more effective population number was, the richer genetic diversity of its offspring was (Ward & Grewe, 1994). Low level of mtDNA polymorphism of carp in Europe was seemingly due to a bottleneck/founder effect at the early stages of domestication (Kohlmann & Kersten, 2013;Napora-Rutkowski et al, 2017).…”

Section: Genetic Polymorphism and Genetic Marker Of The Three Specimentioning

confidence: 99%

Germplasm differences among three species of genus Erythroculter based on morphological characters and gene sequences of mitochondrial CO I and Cyt b

et al. 2019

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Fish of genus Erythroculter (Cypriniformes, Cyprinidae, Abramidinae) are important commercial freshwater species in China. In this work, morphological characters and gene sequences of mitochondrial CO I and Cyt b were analysed to investigate the germplasm differences among E. mongolicus, E. dabryi and E. ilishaeformis. Results demonstrated that about countable trait, there were six traits (scale in/ above/ below lateral line, gill‐raker in first left gill‐arch and branched fin‐ray in anal/ pectoral fin) showed significant differences. Gene fragments of CO I and Cyt b was 905 bps and 1,142 bps respectively. In CO I, there were 54.3% base content of A + T, 14 haplotypes and 84 nucleotide variable sites. As to Cyt b, there were 56.3% base content of A + T, 20 haplotypes and 142 nucleotide variable sites. In both CO I and Cyt b, the highest and lowest nucleotide diversity was detected in E. ilishaeformis and E. mongolicus respectively. According to morphological distance, genetic distance, genetic differentiation coefficient (Fst) and gene flow, E. dabryi was grouped together with E. ilishaeformis firstly, and then clustered with E. mongolicus. These results might be useful in the conservation and management of fishery resources of these three species.

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“…Two congeneric species of carp from Asia, the Silver Carp (Hypophthalmichthys molitrix) and the Bighead Carp (H. nobilis), together known as Bigheaded Carps, and globally some of the most commonly cultured species [19], were introduced in the United States in the late 1970s, escaped, and have become highly invasive in the Mississippi River [20]. Although both of these Asian Carp species share many similarities with the Common Carp, they represent a distinctly different evolutionary branch that diverged several million years ago [21,22]. These naturally sympatric Asian Carps are now found in great abundance throughout most of the Mississippi River, and techniques to monitor their distribution and control them are sought.…”

Section: Introductionmentioning

confidence: 99%

A Blend of F Prostaglandins Functions as an Attractive Sex Pheromone in Silver Carp

Sorensen

Rue

Leese

et al. 2019

Fishes

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A series of laboratory experiments tested the hypothesis that the Silver Carp (Hypophthalmichthys molitrix), an invasive river carp from China, employs a prostaglandin F2α-derived sex pheromone that is attractive and species-specific. Using electro-olfactogram recording (EOG), we found that the olfactory system of this species is acutely sensitive to three F-series prostaglandins (PGFs) at picomolar concentrations and that this sensitivity is enhanced when juveniles are masculinized using androgens, consistent with expectations of a sex pheromone. Individual PGFs had behavioral activity but it was low, suggesting a mixture might be important. To pursue this possibility, we implanted carps with osmotic pumps containing prostaglandin F2α (PGF2α), a treatment previously shown to elicit release of a PGF-based spawning pheromone in the Common Carp. We found that PGF2α-implanted Silver Carp released a species-specific odor that contained a blend of PGF2α and two of its metabolites, which masculinized individuals detected and were attracted to with high sensitivity. Finally, we found that a mixture of these PGFs was attractive to masculinized Silver Carp, while a different mixture released by Bighead Carp was not. We conclude that Silver Carp likely use a species-specific PGF2α-derived sex pheromone that is probably released at spawning and might be useful in its control. Confirmatory studies that explore pheromone function in naturally mature Silver Carp using natural odors in the field should now be conducted to further confirm our proof-of-concept study.

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Deeper insight into the origin and spread of European common carp (Cyprinus carpio carpio) based on mitochondrial D-loop sequence polymorphisms

Cited by 23 publications

References 34 publications

Phylogeny and Evolution of Multiple Common Carp (Cyprinus carpio L.) Populations Clarified by Phylogenetic Analysis Based on Complete Mitochondrial Genomes

Phylogeny and Evolution of Multiple Common Carp (Cyprinus carpio L.) Populations Clarified by Phylogenetic Analysis Based on Complete Mitochondrial Genomes

Germplasm differences among three species of genus Erythroculter based on morphological characters and gene sequences of mitochondrial CO I and Cyt b

A Blend of F Prostaglandins Functions as an Attractive Sex Pheromone in Silver Carp

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