Many protein kinases are regulated by phosphorylation in the activation loop, which is required for enzymatic activity. Glutamic acid can substitute for phosphothreonine in some proteins activated by phosphorylation, but this substitution (T169E) at the site of activation loop phosphorylation in the Saccharomyces cerevisiae cyclin-dependent kinase (Cdk) Cdc28p blocks biological function and protein kinase activity. Using cycles of error-prone DNA amplification followed by selection for successively higher levels of function, we identified mutant versions of Cdc28p-T169E with high biological activity. The enzymatic and biological activity of the mutant Cdc28p was essentially normally regulated by cyclin, and the mutants supported normal cell cycle progression and regulation. Therefore, it is not a requirement for control of the yeast cell cycle that Cdc28p be cyclically phosphorylated and dephosphorylated. These CDC28 mutants allow viability in the absence of Cak1p, the essential kinase that phosphorylates Cdc28p-T169, demonstrating that T169 phosphorylation is the only essential function of Cak1p. Some growth defects remain in suppressed cak1 cdc28 strains carrying the mutant CDC28 genes, consistent with additional nonessential roles for CAK1.Cyclin-dependent kinase (Cdk) activation loop phosphorylation is required for Cdk activity (9,20,39) and may be an important part of the kinase activity cycle. A glutamic acid substitution for the phosphorylated threonine in fission yeast Cdc2 has partial biological activity consistent with failure to exit from mitosis (14). In the budding yeast Cdk Cdc28p, the same mutation (T169E) resulted in a low level of Cdc28p kinase activity, correlated with a limited ability to complement the cdc28-1N allele (an allele with a G 2 -M-phase-specific defect) and no ability to complement the G 1 -S and G 2 -M-defective cdc28-4 allele (27). Although the inactivity of cdc28-T169E could indicate a requirement for a cycle of T169 phosphorylation and dephosphorylation for cell cycle control (27), the glutamic acid substitution might simply be unable to fully substitute chemically for phosphothreonine in supporting active kinase architecture (20).Here, we have used molecular evolution starting with the inactive cdc28-T169E to address two questions. First, is the combination of activation loop phosphorylation and dephosphorylation in Cdc28p of regulatory significance (as with mitogen-activated protein [MAP] kinases, for example [1,20]), or is it only a precondition for enzymatic activity that is not subject to regulatory input? If phosphorylation or dephosphorylation of this site controls Cdc28p activity in some regulatory context, then a version of Cdc28p not subject to this control should abrogate this regulation.Second, the essential gene CAK1/CIV1 encodes a kinase required for Cdc28p-T169 phosphorylation (12,21,47). Does Cak1p/Civ1p have other essential roles in addition to Cdc28p activation, such as the activation of other essential Cdk's such as Kin28 (2, 47)?
MATERIALS AND METHODSCDC28...