2020
DOI: 10.1177/1040638720967506
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Detection of severe fever with thrombocytopenia syndrome virus and other viruses in cats via unbiased next-generation sequencing

Abstract: We used unbiased next-generation sequencing (NGS) to detect unknown viruses in cats. Serum or plasma samples were obtained from clinically ill cats with suspected acute viral infections. Nucleic acid was extracted from serum or plasma samples to construct a complementary DNA library for NGS. Comprehensive nucleotide sequencing analyses enabled detection of the genomes of various viruses, including the severe fever with thrombocytopenia syndrome virus, feline immunodeficiency virus, feline morbillivirus, parvov… Show more

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Cited by 8 publications
(8 citation statements)
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“…We have continuously attempted to detect unknown viruses using blood from cases of fever of unknown origin. In this study, we applied an NGS-based comprehensive virus detection method described previously [ 10 ] with some modifications. A heparinized plasma sample was obtained from a cat with fever of unknown cause (Case 1), and total nucleic acids (DNA and RNA) were extracted from 200 μL of the sample using the NucleoSpin Virus kit (Machery-Nagel, Düren, Germany).…”
Section: Methodsmentioning
confidence: 99%
“…We have continuously attempted to detect unknown viruses using blood from cases of fever of unknown origin. In this study, we applied an NGS-based comprehensive virus detection method described previously [ 10 ] with some modifications. A heparinized plasma sample was obtained from a cat with fever of unknown cause (Case 1), and total nucleic acids (DNA and RNA) were extracted from 200 μL of the sample using the NucleoSpin Virus kit (Machery-Nagel, Düren, Germany).…”
Section: Methodsmentioning
confidence: 99%
“…Similarly, a patient with SFTS, who might have been infected with SFTSV from a companion dog and was virologically diagnosed with SFTSV infection was also reported (67)(68)(69). Diagnoses of SFTSV infection in cats were based on the molecular detection of the SFTSV genome (26,27,61,(70)(71)(72). CFRs of cats with SFTSV infection in Nagasaki and Kagoshima Prefectures in Japan were 58.0% (22/38) and 62.5% (15/24), respectively, suggesting that SFTSV infections cause a severe and fatal disease in cats (70,71).…”
Section: Cats and Dogsmentioning
confidence: 98%
“…However, this could be different in noncontrolled situations where host and virus variables could lead to different outcomes. This gap of knowledge has been investigated by Ito et al (2023) [60] after the detection of FeMV in a cat that was subjected to an investigation of unknown viruses as part of a study in cats with fever using unbiased next-generation sequencing [61]. The retrospective controlled study was performed in an area endemic for the zoonotic severe fever with thrombocytopenia syndrome (SFTS) caused in East Asia by Huaiyangshanbanyang virus; most of the studied cats had fever, leukopenia, thrombocytopenia, and jaundice, but SFTS and parvovirus infections had been excluded by blood PCR [61].…”
Section: Acute Femv Infection As Defined In Cats By Experimental Mode...mentioning
confidence: 99%