Differential network analysis reveals the key role of the ECM-receptor pathway in α-particle-induced malignant transformation

Yan, Wenying; Hu, Wentao; Song, Yidan; Liu, Xingyi; Zhou, Ziyun; Li, Wanshi; Cao, Zhifei; Pei, Weiwei; Zhou, Guangming; Hu, Guang

doi:10.1016/j.omtn.2024.102260

Molecular Therapy - Nucleic Acids

2024

DOI: 10.1016/j.omtn.2024.102260

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Differential network analysis reveals the key role of the ECM-receptor pathway in α-particle-induced malignant transformation

Wenying Yan,

Wentao Hu,

Yidan Song

et al.

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Cited by 3 publications

References 52 publications

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Recent progresses on space life science research in China

Kong,

Qin,

Pei

et al. 2024

Life Sciences in Space Research

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Recent progresses on space life science research in China

Kong,

Qin,

Pei

et al. 2024

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Network biology approach unveils transcriptomic alterations triggered by particle radiation

Liu,

Wang

2024

Molecular Therapy - Nucleic Acids

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Coagulation factor II thrombin receptor as a promising biomarker in breast cancer management

Dong,

Bao

2024

Open Life Sciences

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This study aims to comprehensively investigate the role of coagulation factor II thrombin receptor (F2R) in breast cancer (BC) and to evaluate its potential as a biomarker in this context. Data on female BC were retrieved from the TCGA database. Comparative analyses were performed, including enrichment analysis, tumor immune microenvironment analysis, drug sensitivity testing, molecular docking, and cell-based experiments, to assess the expression and function of F2R in BC. Statistical analyses and graphical representations were conducted using R software. The study confirmed a significant upregulation of F2R in BC, which was associated with a more favorable prognosis. Clinical correlation analysis revealed a strong association between F2R expression and key clinical parameters, such as estrogen receptor and progesterone receptor status. Additionally, genes co-expressed with F2R were significantly linked to various biological processes, including cell cycle regulation, oxidative phosphorylation, ribosomal function, and extracellular matrix interactions. F2R also showed associations with immune modulators, particularly CD200 and NRP1. Drug sensitivity analysis, molecular docking, and cell experiments consistently demonstrated positive correlations between F2R expression and sensitivity to dasatinib. This study underscores the potential of F2R as a valuable biomarker in BC, providing insights into the molecular mechanisms underlying tumorigenesis.

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Differential network analysis reveals the key role of the ECM-receptor pathway in α-particle-induced malignant transformation

Cited by 3 publications

References 52 publications

Recent progresses on space life science research in China

Recent progresses on space life science research in China

Network biology approach unveils transcriptomic alterations triggered by particle radiation

Coagulation factor II thrombin receptor as a promising biomarker in breast cancer management

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