Dissection of plant microbiota and plant-microbiome interactions

Choi, Kihyuck; Khan, Raees; Lee, Seon-Woo

doi:10.1007/s12275-021-0619-5

Cited by 49 publications

(27 citation statements)

References 120 publications

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“…The root microbiota contributes to plant nutrient absorption and resistance to biotic and abiotic stresses (Mueller and Sachs, 2015; Vandenkoornhuyse et al, 2015; Compant et al, 2019; Liu et al, 2020; Choi et al, 2021; Zhang et al, 2021a). Importantly, the function of the microbial community is closely associated with the regulation of the microbial community by the host (Figure 1).…”

Section: The Effects Of Root Microbiota On Plant Developmentmentioning

confidence: 99%

The root microbiome: Community assembly and its contributions to plant fitness

Bai

Liu

Qiu

et al. 2022

JIPB

202

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Section: The Effects Of Root Microbiota On Plant Developmentmentioning

confidence: 99%

The root microbiome: Community assembly and its contributions to plant fitness

Bai

Liu

Qiu

et al. 2022

JIPB

202

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“…Previous studies demonstrated that plants could recruit a distinct microbiota from the surrounding soil microbiome and induct them as plant endophytes [19,20]. However, the composition of endophytes is influenced by the plant species, genotype, and growth-stage [21]. Different plants might have distinct endophytes that might influence the plant tolerance to environmental stresses or nutrient-poor soils.…”

Section: Plant-to-microbe Signalsmentioning

confidence: 99%

Microbiome engineering and plant biostimulants for sustainable crop improvement and mitigation of biotic and abiotic stresses

et al. 2022

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Globally, despite the intense agricultural production, the output is expected to be limited by emerging infectious plant diseases and adverse impacts of climate change. The annual increase in agricultural output to sustain the human population at the expense of the environment has exacerbated the current climate conditions and threatened food security. The demand for sustainable agricultural practice is further augmented with the exclusion of synthetic fertilizers and pesticides. Therefore, the application of plant microbiome engineering and (natural) biostimulants has been at the forefront as an environment-friendly approach to enhance crop production and increase crop tolerance to adverse environmental conditions. In this article, we explore the application of microbiome engineering and plant biostimulants as a sustainable approach to mitigating biotic and abiotic stresses and improving nutrient use efficiency to promote plant growth and increase crop yield. The advancement/understanding in plant-biostimulant interaction relies on the current scientific research to elucidate the extent of benefits conferred by these biostimulants under adverse conditions.

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“…Rhizobia-legume symbiosis and arbuscular mycorrhizal associations are examples of well-studied plant-microbe relationships that have been successfully used in agriculture (Bhattacharyya et al, 2016). Conventionally, beneficial microbes are selected based on in vitro screening for specific taxa with one or more PGP traits, such as nitrogen fixation, phosphorus solubilization, production of growth-regulating hormones, etc., with limited assessment under controlled environmental conditions (Glick, 2012;Choi et al, 2021). Inconsistent production under field conditions is a major problem as inoculants often fail to compete with indigenous soil microbes under different climatic conditions, soil type and other environmental factors (Finkel et al, 2017;Baliyan et al, 2018;Qiu et al, 2019;de Souza et al, 2020).…”

Section: Synthetic Community Approach In Sustainable Agriculturementioning

confidence: 99%

The Role of Synthetic Microbial Communities (SynCom) in Sustainable Agriculture

Shayanthan

Ordoñez²,

Oresnik³

2022

Front. Agron.

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Modern agriculture faces several challenges due to climate change, limited resources, and land degradation. Plant-associated soil microbes harbor beneficial plant growth-promoting (PGP) traits that can be used to address some of these challenges. These microbes are often formulated as inoculants for many crops. However, inconsistent productivity can be a problem since the performance of individual inoculants/microbes vary with environmental conditions. Over the past decade, the ability to utilize Next Generation Sequencing (NGS) approaches with soil microbes has led to an explosion of information regarding plant associated microbiomes. Although this type of work has been predominantly sequence-based and often descriptive in nature, increasingly it is moving towards microbiome functionality. The synthetic microbial communities (SynCom) approach is an emerging technique that involves co-culturing multiple taxa under well-defined conditions to mimic the structure and function of a microbiome. The SynCom approach hopes to increase microbial community stability through synergistic interactions between its members. This review will focus on plant-soil-microbiome interactions and how they have the potential to improve crop production. Current approaches in the formulation of synthetic microbial communities will be discussed, and its practical application in agriculture will be considered.

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Dissection of plant microbiota and plant-microbiome interactions

Cited by 49 publications

References 120 publications

The root microbiome: Community assembly and its contributions to plant fitness

The root microbiome: Community assembly and its contributions to plant fitness

Microbiome engineering and plant biostimulants for sustainable crop improvement and mitigation of biotic and abiotic stresses

The Role of Synthetic Microbial Communities (SynCom) in Sustainable Agriculture

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