Draft Whole-Genome Sequence of
            <i>Trichoderma gamsii</i>
            T6085, a Promising Biocontrol Agent of
            <i>Fusarium</i>
            Head Blight on Wheat

Baroncelli, Riccardo; Zapparata, Antonio; Piaggeschi, Giulia; Sarrocco, Sabrina; Vannacci, Giovanni

doi:10.1128/genomea.01747-15

Cited by 43 publications

(25 citation statements)

References 17 publications

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“…Besides, Trichoderma represents one of the most important expression systems that is widely used to produce industrial enzymes on large scale (Singh et al 2015 ). Up to now, the genome sequences of 13 Trichoderma strains have been completed (Halliwell and Griffin 1973 ; Martinez et al 2008 ; Kubicek et al 2011 ; Studholme et al 2013 ; Xie et al 2014 ; Baroncelli et al 2015 , 2016 ; Shikunne et al 2015 ; Yang et al 2015 ; Lee et al 2017 ), and the number keeps increasing. Sequence analysis of the genomes of T. viride , T. reesei , T. harzianum and T. gamsii indicated that Trichoderma harbors a great variety of lipase genes.…”

Section: Introductionmentioning

confidence: 99%

An alkaline and surfactant-tolerant lipase from Trichoderma lentiforme ACCC30425 with high application potential in the detergent industry

Wang

et al. 2018

AMB Expr

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Alkaline lipases with adaptability to low temperatures and strong surfactant tolerance are favorable for application in the detergent industry. In the present study, a lipase-encoding gene, TllipA, was cloned from Trichoderma lentiforme ACCC30425 and expressed in Pichia pastoris GS115. The purified recombinant TlLipA was found to have optimal activities at 50 °C and pH 9.5 and retain stable over the pH range of 6.0–10.0 and 40 °C and below. When using esters of different lengths as substrates, TlLipA showed preference for the medium length p-nitrophenyl octanoate. In comparison to commercial lipases, TlLipA demonstrated higher tolerance to various surfactants (SDS, Tween 20, and Triton X100) and retained more activities after incubation with Triton X100 for up to 24 h. These favorable characteristics make TlLipA prospective as an additive in the detergent industry.

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Section: Introductionmentioning

confidence: 99%

An alkaline and surfactant-tolerant lipase from Trichoderma lentiforme ACCC30425 with high application potential in the detergent industry

Wang

et al. 2018

AMB Expr

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“…Since the release of the first complete Trichoderma genome sequence in 2008 belonging to the industrially important cellulase producer T. reesei (Martinez et al, 2008 ) and its subsequent comparative analysis with the genomes of the biocontrol species T. virens and T. atroviride (Kubicek et al, 2011 ; Schmoll et al, 2016 ), the number of full genome sequences publicly available in databases for Trichoderma strains is growing rapidly (Baroncelli et al, 2015 , 2016 ; Kuo et al, 2015 ; Shi-Kunne et al, 2015 ; Compant et al, 2017 ), which opens the way for using comparative genome analysis to identify specific endogenous markers. An example is the study of Mahfooz et al ( 2016 ), who performed a comparative in silico analysis of SSR sequences in the genomes of T. reesei and three biocontrol species of the genus, and developed 6-6 primer pairs for the amplification of polymorphic markers from T. atroviride and T. harzianum .…”

Section: “Omics” Approaches In the Service Of Trichoderma mentioning

confidence: 99%

Molecular Tools for Monitoring Trichoderma in Agricultural Environments

et al. 2018

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Various Trichoderma species possess significance in agricultural systems as biofertilizers or biocontrol agents (BCAs). Besides these beneficial features, certain Trichoderma species can also act as agricultural pests, causing the green mold disease of cultivated mushrooms. This double-faced nature of the genus in agricultural environments points at the importance of proper monitoring tools, which can be used to follow the presence and performance of candidate as well as patented and/or registered biocontrol strains, to assess the possible risks arising from their application, but also to track harmful, unwanted Trichoderma species like the green molds in mushroom growing facilities. The objective of this review is to discuss the molecular tools available for the species- and strain-specific monitoring of Trichoderma, ranging from immunological approaches and fingerprinting tools to exogenous markers, specific primers used in polymerase chain reaction (PCR) as well as “omics” approaches.

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“…The genome sequence of the mycotoxigenic F. graminearum ITEM 124 provides a novel source for comparative genomics studies and also represents a useful platform to study fungal-fungal interactions, such as the mycoparasitic relationship established with the beneficial isolate T. gamsii T6085, whose genome is also available ( 14 ).…”

Section: Genome Announcementmentioning

confidence: 99%

Genome Sequence of Fusarium graminearum ITEM 124 (ATCC 56091), a Mycotoxigenic Plant Pathogen

et al. 2017

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Fusarium graminearum is among the main causal agents of Fusarium head blight (FHB), or scab, of wheat and other cereals, caused by a complex of Fusarium species, worldwide. Besides causing economic losses in terms of crop yield and quality, F. graminearum poses a severe threat to animal and human health. Here, we present the first draft whole-genome sequence of the mycotoxigenic Fusarium graminearum strain ITEM 124, also providing useful information for comparative genomics studies.

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Draft Whole-Genome Sequence of Trichoderma gamsii T6085, a Promising Biocontrol Agent of Fusarium Head Blight on Wheat

Cited by 43 publications

References 17 publications

An alkaline and surfactant-tolerant lipase from Trichoderma lentiforme ACCC30425 with high application potential in the detergent industry

An alkaline and surfactant-tolerant lipase from Trichoderma lentiforme ACCC30425 with high application potential in the detergent industry

Molecular Tools for Monitoring Trichoderma in Agricultural Environments

Genome Sequence of Fusarium graminearum ITEM 124 (ATCC 56091), a Mycotoxigenic Plant Pathogen

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