Research on urban ecosystem services (ES) covers many regions globally, yet significant gaps remain in several areas, including Russia. Furthermore, the number of publications on Russian ES is still very low, and most of them focus on ES assessment on the national level which results in an incomplete understanding of ES provision in Russian cities. To fill this gap, 197 publications on urban ES have been systematically reviewed. Those mostly included research on urban ES in Russia as well as in other cities of the world that represented case studies within international collaborations of Russian scientists with other partners. The paper presents the main aspects of the ES concept adoption and operationalizing in the Russian scientific discourse, by providing an overview of the current research on the relationships between humans and urban ecosystems. Spatially, the majority of studies focused on large cities; herewith field surveys, statistical analysis, expert evaluations, and mapping were often used as the main research methods. Four key challenge areas have been revealed: anthropogenic pressure on soils and vegetation, urban green spaces (UGS) and their quantity and quality for ES provision, the value of ES assessment for urban planning, and payments for ES. To address these challenges, future research should focus on the role of urban ES for city resilience and sustainability, ecosystem disservices, rural–urban interactions, broader testing and validation of ES mapping and assessment as well as better integration of ES in economic, regulatory and compensation mechanisms.