2020
DOI: 10.1038/s41598-020-67782-0
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Elongating maize root: zone-specific combinations of polysaccharides from type I and type II primary cell walls

Abstract: the dynamics of cell wall polysaccharides may modulate the cell wall mechanics and thus control the expansion growth of plant cells. the unique composition of type ii primary cell wall characteristic of grasses suggests that they employ specific mechanisms for cell enlargement. We characterized the transcriptomes in five zones along maize root, clustered the expression of genes for numerous glycosyltransferases and performed extensive immunohistochemical analysis to relate the changes in cell wall polysacchari… Show more

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Cited by 40 publications
(70 citation statements)
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“…In addition, the most abundant phyla involved in the fermentation of glucose were Firmicutes , Bacteroidetes , and Proteobacteria, of which especially Firmicutes (genus Clostridium ) were connected to the highest production of SCFAs [ 51 ]. Firmicutes are known to produce butyrate and other SCFAs to maintain intestinal health by suppressing inflammation and providing energy to enterocytes [ 52 , 53 ]. According to our results, C lostridium-sp-Marseille-p3244 belonging to Lachnospiraceae was a butyrate-producing bacteria.…”
Section: Discussionmentioning
confidence: 99%
“…In addition, the most abundant phyla involved in the fermentation of glucose were Firmicutes , Bacteroidetes , and Proteobacteria, of which especially Firmicutes (genus Clostridium ) were connected to the highest production of SCFAs [ 51 ]. Firmicutes are known to produce butyrate and other SCFAs to maintain intestinal health by suppressing inflammation and providing energy to enterocytes [ 52 , 53 ]. According to our results, C lostridium-sp-Marseille-p3244 belonging to Lachnospiraceae was a butyrate-producing bacteria.…”
Section: Discussionmentioning
confidence: 99%
“…The seedlings were grown hydroponically in the dark at 27°C in distilled water. The primary root was subdivided into zones according to the following pattern: root cap, meristem (0-1 mm from the root cap junction), early elongation (1-2 mm), elongation (2-6 mm), and late elongation (7-11 mm), as described in Kozlova et al (2020) and ( Figure 2 ).…”
Section: Methodsmentioning
confidence: 99%
“…In addition to the previously published data ( Kozlova et al, 2020 , BioProject: PRJNA639682 ), twenty more individual libraries of mRNAs were obtained from the same five zones of the maize primary root in four biological replicates were analyzed using an Illumina sequencing technology. Root segments of ca.…”
Section: Methodsmentioning
confidence: 99%
“…NGS-based transcriptomics is widely implemented in various fields of plant sciences. It is used to study the processes of plant cell growth and specialization [ 105 , 106 , 107 , 108 ], to reveal the molecular events associated with the development of mutualistic interactions between a plant and its symbionts [ 109 ], and to study the regulation of photosynthesis [ 110 , 111 ] and the circadian control in plants [ 112 ], etc. NGS-based transcriptomics is often applied to plant pathology and stress studies.…”
Section: Transcriptomicsmentioning
confidence: 99%