EOSC-Life EOSC repository deployment for project demonstrators

Parkinson, Helen; Gribbon, Philip; Sarkans, Ugis; Witt, Gesa; Zaliani, Andrea; Köhler, Manfred; Swedlow, Jason R.; Burel, Jean‐Marie; Swertz, Morris A.; Enckevort, Esther van; Holub, Petr; Massimi, Marzia; Matteonie, Rafaele; Maier, Holger R.; Hinttala, Reetta; Heikkinen, Anne; Gormanns, Philipp; Caño, Laura del; Vasseur, Laurent; Leblanc, Sophie; Hérault, Yann; Kontoyiannis, Dimitris L.; Chandras, Christina; Panou, Dimitra; Coronado, José Miguel López; Rosa, Aznar Novella,; Robert, Vincent; Amor, Ammar Ben Hadj; Casarégola, Serge; Legras, Jean Luc; Mistou, Michel‐Yves; Romano, Paolo; Perseil, Isabelle; David, R D Beatrice Donaldson; Pieruschka, Roland; Exter, Katrina; Portier, Marc; Canham, Steve; Ohmann, Christian; Goryanin, Sergey; Fratelli, Maddalena; Goble, Carole; Owen, Stuart; Soiland‐Reyes, Stian; Juty, Nick; Sansone, Susanna Assunta; McQuilton, Peter; Roos, Marco; Bonino, Luiz Olavo

doi:10.5281/zenodo.4432029

Cited by 1 publication

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“…Data and software must be archived in online portals along with rich and semantically annotated metadata to be findable and usable over the long term. Sustainability through re-use requires that the data contain, or be intimately linked to, their own metadata to ensure that the data are useful and understandable, even after they have been downloaded from the portal (Parkinson et al, 2021(Parkinson et al, , 2022 in Appendix 1). For instance, the PDB-REDO resource (EOSC-Life Open Call project) exploits collections of curated crystallographic datasets to refine, rebuild and validate structural models of biomolecules automatically (Joosten et al, 2014).…”

Section: Sustainability Of Sharing and Shared (Meta)datamentioning

confidence: 99%

“Be sustainable”: EOSC‐Life recommendations for implementation of FAIR principles in life science data handling

David,

Rybina,

Burel

et al. 2023

The EMBO Journal

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The main goals and challenges for the life science communities in the Open Science framework are to increase reuse and sustainability of data resources, software tools, and workflows, especially in large‐scale data‐driven research and computational analyses. Here, we present key findings, procedures, effective measures and recommendations for generating and establishing sustainable life science resources based on the collaborative, cross‐disciplinary work done within the EOSC‐Life (European Open Science Cloud for Life Sciences) consortium. Bringing together 13 European life science research infrastructures, it has laid the foundation for an open, digital space to support biological and medical research. Using lessons learned from 27 selected projects, we describe the organisational, technical, financial and legal/ethical challenges that represent the main barriers to sustainability in the life sciences. We show how EOSC‐Life provides a model for sustainable data management according to FAIR (findability, accessibility, interoperability, and reusability) principles, including solutions for sensitive‐ and industry‐related resources, by means of cross‐disciplinary training and best practices sharing. Finally, we illustrate how data harmonisation and collaborative work facilitate interoperability of tools, data, solutions and lead to a better understanding of concepts, semantics and functionalities in the life sciences.

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Section: Sustainability Of Sharing and Shared (Meta)datamentioning

confidence: 99%