2021
DOI: 10.1016/j.actatropica.2021.106075
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First morphogenetic analysis of parasite eggs from Schistosomiasis haematobium infected sub-Saharan migrants in Spain and proposal for a new standardised study methodology

Abstract: HAL is a multi-disciplinary open access archive for the deposit and dissemination of scientific research documents, whether they are published or not. The documents may come from teaching and research institutions in France or abroad, or from public or private research centers. L'archive ouverte pluridisciplinaire HAL, est destinée au dépôt et à la diffusion de documents scientifiques de niveau recherche, publiés ou non, émanant des établissements d'enseignement et de recherche français ou étrangers, des labor… Show more

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Cited by 5 publications
(11 citation statements)
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References 60 publications
(80 reference statements)
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“…For mitochondrial cox 1 profiling, an RD-PCR of each of the 162 eggs was performed using one universal forward (5′-TTTTTTGGTCATCCTGAGGTGTAT-3′) and three reverse species-specific primers (5′-CACAGGATCAGACAAACGAGTACC-3′, 5′-TGCAGATAAAGCCACCCCTGTG-3′ and 5′-TGATAATCAATGACCCTGCAATAA-3′) [ 26 , 27 , 28 ] to amplify a specific mtDNA cox 1 region (differing in length) for S. bovis (306 bp), S. mansoni (375 bp) and S. haematobium (543 bp). The PCR reactions were carried out in a final volume of 12.6 μL, comprising 8 μL of DNA template, 2.5 μL of 5X Colorless GoTaq Flexi Buffer, 0.75 μL of MgCl 2 (25 mM), 0.25 μL of dNTP (10 mM), 1 μL of primer mix (1 μM), 0.1 μL of GoTaq G2 Hot Start Polymerase (Promega, Madison, WI, USA) and using PCR conditions as previously described [ 23 ]. The amplified products were separated electrophoretically on a 2.5% agarose gel containing GelRed (Biotium, San Francisco, CA, USA).…”
Section: Methodsmentioning
confidence: 99%
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“…For mitochondrial cox 1 profiling, an RD-PCR of each of the 162 eggs was performed using one universal forward (5′-TTTTTTGGTCATCCTGAGGTGTAT-3′) and three reverse species-specific primers (5′-CACAGGATCAGACAAACGAGTACC-3′, 5′-TGCAGATAAAGCCACCCCTGTG-3′ and 5′-TGATAATCAATGACCCTGCAATAA-3′) [ 26 , 27 , 28 ] to amplify a specific mtDNA cox 1 region (differing in length) for S. bovis (306 bp), S. mansoni (375 bp) and S. haematobium (543 bp). The PCR reactions were carried out in a final volume of 12.6 μL, comprising 8 μL of DNA template, 2.5 μL of 5X Colorless GoTaq Flexi Buffer, 0.75 μL of MgCl 2 (25 mM), 0.25 μL of dNTP (10 mM), 1 μL of primer mix (1 μM), 0.1 μL of GoTaq G2 Hot Start Polymerase (Promega, Madison, WI, USA) and using PCR conditions as previously described [ 23 ]. The amplified products were separated electrophoretically on a 2.5% agarose gel containing GelRed (Biotium, San Francisco, CA, USA).…”
Section: Methodsmentioning
confidence: 99%
“…The information provided by the maternally inherited mtDNA profiling was complemented with the partial sequence of the 5.8S rRNA gene and the complete ITS-2 of the rDNA. PCR amplification and sequencing were performed independently on each of the 162 eggs using primers 3S and A28S [ 23 , 29 , 30 , 31 ], designed in the flaking regions of the 5.8S and 28S rRNA genes. PCR conditions were an activation step of 4 min at 94 °C, followed by 32 cycles of 55 secs at 94 °C, 1 min at 55–62 °C and 1.30 min at 72 °C with a final extension of 5 min at 72 °C followed by a final cooling at 4 °C.…”
Section: Methodsmentioning
confidence: 99%
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“…The PCA, CVA and Mahalanobis distances were performed using both the Collecting Landmarks for Identification and Characterization package and the available online XYOM software (https://xyom.io/) and tested by non-parametric permutation tests with 1000 iterations each. Values were considered statistically significant when P < 0.05 (Dujardin & Dujardin, 2019;García-Sánchez et al, 2019;Reguera-Gomez et al, 2021). Nevertheless, to avoid matrix singularities, some measurements were discarded because of their partial overlap with other measurements.…”
Section: Methodsmentioning
confidence: 99%
“…For this reason, new tools should be applied to advance in diagnostics. Furthermore, morphological analyses are necessary to complement molecular techniques (Valero et al, 2001(Valero et al, , 2009(Valero et al, , 2012García-Sánchez et al, 2019Reguera-Gomez et al, 2021).…”
Section: Introductionmentioning
confidence: 99%