2011
DOI: 10.1038/srep00167
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Generation of mouse ES cell lines engineered for the forced induction of transcription factors

Abstract: Here we report the generation and characterization of 84 mouse ES cell lines with doxycycline-controllable transcription factors (TFs) which, together with the previous 53 lines, cover 7–10% of all TFs encoded in the mouse genome. Global gene expression profiles of all 137 lines after the induction of TFs for 48 hrs can associate each TF with the direction of ES cell differentiation, regulatory pathways, and mouse phenotypes. These cell lines and microarray data provide building blocks for a variety of future … Show more

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Cited by 48 publications
(79 citation statements)
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“…This engineered ESC line was originally generated by Dr Minoru Ko at the National Institute of Aging (Correa-Cerro et al, 2011). Cells were grown on a feeder layer of mitomycin-treated puromycinresistant mouse embryonic fibroblasts (MEFs) in standard ESC medium, Fig.…”
Section: Tfap2c-inducible Esc and Tsc Culturementioning
confidence: 99%
“…This engineered ESC line was originally generated by Dr Minoru Ko at the National Institute of Aging (Correa-Cerro et al, 2011). Cells were grown on a feeder layer of mitomycin-treated puromycinresistant mouse embryonic fibroblasts (MEFs) in standard ESC medium, Fig.…”
Section: Tfap2c-inducible Esc and Tsc Culturementioning
confidence: 99%
“…1A-C) (Nishiyama et al, 2009;Correa-Cerro et al, 2011). From a list of 137 TFs sorted by the magnitude of transcriptome perturbation, we arbitrarily selected the top 36 TFs (Fig.…”
Section: Identification Of Tfs That Direct Mouse Esc Differentiation mentioning
confidence: 99%
“…We have measured the global gene expression profiles (i.e. transcriptome) of these ESC lines 48 h after overexpressing each TF (Correa-Cerro et al, 2011;Nishiyama et al, 2009). By comparing these transcriptome data to the publicly available expression profiles of a variety of cell types (Su et al, 2002;Wu et al, 2009), we generated a correlation matrix that can help to predict the TF-induced direction of ESC differentiation (Correa-Cerro et al, 2011).…”
Section: Introductionmentioning
confidence: 99%
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