2016
DOI: 10.1186/s40793-016-0178-2
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High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains

Abstract: Pseudomonas has the highest number of species out of any genus of Gram-negative bacteria and is phylogenetically divided into several groups. The Pseudomonas putida phylogenetic branch includes at least 13 species of environmental and industrial interest, plant-associated bacteria, insect pathogens, and even some members that have been found in clinical specimens. In the context of the Genomic Encyclopedia of Bacteria and Archaea project, we present the permanent, high-quality draft genomes of the type strains… Show more

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Cited by 12 publications
(12 citation statements)
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“…The ability of the investigated P. fulva strain to synthesize desferrioxamines in the presence of Cd 2+ , as revealed in our work, as well as its positive effect on plant growth (especially in metalliferous areas) confirmed in earlier studies [24,49], suggest that this bacterial strain can be successfully applied in microbially assisted phytoremediation of Cd-contaminated areas. However, the concentrations of heavy metals present in the soil should be considered before application, as high concentrations of Cd 2+ (as our UHPLC-MS analysis confirms) can inhibit synthesis of ferrioxamine E and ferrioxamine X2.…”
Section: Discussionsupporting
confidence: 86%
“…The ability of the investigated P. fulva strain to synthesize desferrioxamines in the presence of Cd 2+ , as revealed in our work, as well as its positive effect on plant growth (especially in metalliferous areas) confirmed in earlier studies [24,49], suggest that this bacterial strain can be successfully applied in microbially assisted phytoremediation of Cd-contaminated areas. However, the concentrations of heavy metals present in the soil should be considered before application, as high concentrations of Cd 2+ (as our UHPLC-MS analysis confirms) can inhibit synthesis of ferrioxamine E and ferrioxamine X2.…”
Section: Discussionsupporting
confidence: 86%
“…Methods have been previously published [ 10 ] and are summarized below. Draft sequencing, initial gap closure and annotation were performed by the DOE Joint Genome Institute (JGI) using state-of-the-art sequencing technology [ 17 ].…”
Section: Methodsmentioning
confidence: 99%
“…Mass spectrometry analysis of whole cells was performed as previously described with a Bruker Autoflex mass spectrometer [ 10 ].…”
Section: Methodsmentioning
confidence: 99%
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