HDAC3 is a member of the class I histone deacetylase family that regulates gene expression by deacetylation of histones and non-histone proteins. HDAC3 activity has been shown to be modulated by interaction with the co-repressors NCoR and SMRT. Here, we present evidence that the nuclear protein DBC1 is an endogenous inhibitor of HDAC3. DBC1 has been previously identified as a regulator of some nuclear receptors, the methyltransferase SUV39H1, and the NAD-dependent deacetylase SIRT1. Furthermore, DBC1 has been shown to influence transcription regulation and apoptosis, and it may also act as a tumor suppressor. We found that DBC1 interacts and specifically inhibits the deacetylase HDAC3. This interaction depends on the N terminus of DBC1 and the C terminus of HDAC3. Expression of DBC1 not only inhibited HDAC3 activity but also altered its subcellular distribution. In addition, knockdown of endogenous DBC1 in cells and knock-out in mouse tissues increased HDAC3 deacetylase activity. Together, these results identify DBC1 as a new regulator of HDAC3 and demonstrate that DBC1 is a negative regulator of two key distinct deacetylases, SIRT1 and HDAC3. These findings may lead to a better understanding of the biological roles of DBC1 and HDAC3 in metabolic diseases and cancer.Levels of acetylation in cells are maintained by the complementary activities of two families of enzymes, the histone acetyltransferases and the histone deacetylases (HDACs).
2HDACs are involved in deacetylation of histones and nonhistone proteins, including transcription factors, structural proteins, and enzymes, and have an important role in chromatin structure, gene regulation, and control of cell metabolism and cancer (1-3). Because of the vast list of the cellular roles of HDACs, it is imperative that the mechanisms that regulate these enzymes are completely understood. The HDAC superfamily is vast, and these proteins can be classified into four classes, class I, II, III (sirtuins), and IV, based on their homology. Class I includes HDAC1-HDAC3, and HDAC8; class II includes HDAC4 -HDAC7, HDAC9, and HDAC10; class III consists of members of the sirtuin family of HDACs; and class IV is represented by HDAC11. In the sirtuin family of deacetylases, special attention has been given to SIRT1 due to its important role in stress responses, cell metabolism, and possibly aging and longevity (4, 5). Understanding the regulation of deacetylases has been the focus of intense investigation. However, the precise mechanisms that regulate HDACs have not been defined.We and others have recently described that SIRT1 deacetylase is regulated by interaction with the nuclear protein (DBC1 (deleted in breast cancer-1) (6 -8). DBC1 was initially described as being absent in certain human breast cancers and has been recently shown to bind and regulate SIRT1, nuclear receptors (such as the estrogen and androgen receptors), and the methyltransferase SUV39H1 (9 -11). Furthermore, DBC1 has been implicated as a key component of the molecular mechanism of cellular apoptosis and...