Link between carrot leaf secondary metabolites and resistance to Alternaria dauci

Koutouan, Claude; Clerc, Valérie Le; Baltenweck, Raymonde; Claudel, Patricia; Halter, David; Hugueney, Philippe; Hamama, Latifa; Suel, Anita; Huet, Sébastien; Merlet, Marie-Hélène Bouvet; Briard, Mathilde

doi:10.1038/s41598-018-31700-2

Cited by 30 publications

(25 citation statements)

References 49 publications

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“…As reported by Kathe et al [110], A. radicina is a fungal pathogen causing black rot disease of the carrot. According to Koutouan et al [32], Alternaria leaf blight, caused by A. dauci, is the most damaging foliar disease affecting carrots. In a study by Szopińska et al [1], carrot seedlings and seeds were infected mostly by fungi of the genera Alternaria and Fusarium.…”

Section: Discussionmentioning

confidence: 99%

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The Influence of Trichoderma harzianum Rifai T-22 and Other Biostimulants on Rhizosphere Beneficial Microorganisms of Carrot

et al. 2020

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The principles of good agricultural and horticultural practice, which consider both giving environmental protection and high yielding of plants, require modern cultivation methods. Modern cultivation of horticultural plants uses, for example, cover crops, living mulches, plant growth-promoting microorganisms (PGPMs), plant growth regulators (PGRs) and other biostimulants protecting the soil against degradation and plants against phytopathogens and stress. The purpose of field and laboratory studies was to determine the effect of Trianum P (containing Trichoderma harzianum Rifai T-22 spores), Beta-Chikol (a.s.—chitosan), Timorex Gold 24 EC (based on tea tree oil) and fungicide Zaprawa Nasienna T 75 DS/WS (a.s.—tiuram 75%) on the health of carrot (Daucus carota L.) plants and the microorganism population in the rhizosphere of this plant. Moreover, the antagonistic effect of rhizosphere fungi on selected carrot fungal pathogens was determined. Laboratory mycological analysis allowed one to determine the qualitative and quantitative composition of fungi colonizing the underground parts of carrot plants. In addition, the total population of fungi and bacteria was determined (including Bacillus sp. and Pseudomonas sp.) based on the microbiological analysis of the rhizosphere soil. The application of the plant growth-promoting fungus (Trichoderma harzianum T-22), chitosan and tea tree oil positively influenced the growth, development and health status of carrot plants. T. harzianum T-22, chitosan and fungicide most effectively protected carrots against infection by soil-borne fungi from the genus Alternaria, Fusarium, Haematonectria, Sclerotinia and Rhizoctonia. The rhizosphere population of Bacillus sp. and Pseudomonas sp. in the treatments with Trianum P or Zaprawa Nasienna T 75 DS/WS was bigger than in the other experimental treatments. A reverse relationship was observed in the population of rhizosphere fungi. T. harzianum T-22, chitosan and tea tree oil promoted the growth of antagonistic fungi (Albifimbria sp., Clonostachys sp., Penicillium sp., Talaromyces sp. and Trichoderma sp.) in the carrot rhizosphere. Antagonistic activity of these fungi towards Alternaria dauci, Alternaria radicina, Sclerotinia sclerotiorum and Rhizoctonia solani was higher after the application of the preparations compared to control. Consequently, Trianum P, Beta-Chikol and Timorex Gold 24 EC can be recommended as plant biostimulants in ecological agricultural production, including Daucus carota cultivation.

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Section: Discussionmentioning

confidence: 99%

“…de Bary) and cercospora leaf spot (Cercospora carotae (Pass.) Solheim) [24][25][26][27][28][29][30][31][32][33][34][35][36]. According to Boiteux et al [37] and Naqvi [38], powdery mildew (Erysiphe heraclei DC.)…”

Section: Introductionmentioning

confidence: 99%

The Influence of Trichoderma harzianum Rifai T-22 and Other Biostimulants on Rhizosphere Beneficial Microorganisms of Carrot

et al. 2020

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“…Ultrahigh-pressure liquid chromatography and mass spectrometry (UHPLC-MS) analyses were performed as described previously [57], with some modifications. Metabolites were extracted with methanol (25 µL/mg frozen fresh leaves) supplemented with an external standard (apigenin, 1 mg/L).…”

Section: Metabolomic Analysesmentioning

confidence: 99%

Severe Stunting Symptoms upon Nepovirus Infection Are Reminiscent of a Chronic Hypersensitive-like Response in a Perennial Woody Fruit Crop

Martin

Vigne

Velt

et al. 2021

Viruses

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Virus infection of plants can result in various degrees of detrimental impacts and disparate symptom types and severities. Although great strides have been made in our understanding of the virus–host interactions in herbaceous model plants, the mechanisms underlying symptom development are poorly understood in perennial fruit crops. Grapevine fanleaf virus (GFLV) causes variable symptoms in most vineyards worldwide. To better understand GFLV-grapevine interactions in relation to symptom development, field and greenhouse trials were conducted with a grapevine genotype that exhibits distinct symptoms in response to a severe and a mild strain of GFLV. After validation of the infection status of the experimental vines by high-throughput sequencing, the transcriptomic and metabolomic profiles in plants infected with the two viral strains were tested and compared by RNA-Seq and LC-MS, respectively, in the differentiating grapevine genotype. In vines infected with the severe GFLV strain, 1023 genes, among which some are implicated in the regulation of the hypersensitive-type response, were specifically deregulated, and a higher accumulation of resveratrol and phytohormones was observed. Interestingly, some experimental vines restricted the virus to the rootstock and remained symptomless. Our results suggest that GFLV induces a strain- and cultivar-specific defense reaction similar to a hypersensitive reaction. This type of defense leads to a severe stunting phenotype in some grapevines, whereas others are resistant. This work is the first evidence of a hypersensitive-like reaction in grapevine during virus infection.

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“…The extracted ion chromatograms that display a peak shape are then added to the peak lists. centWave as an efficient algorithm for high-resolution complex data and it became the basic one and used routinely to detect specialized plant metabolites (only to mention a few applications: [97,98,99]. An extension and complement of centWave is the Warpgroup method for increasing real peaks detection [100].…”

Section: Bioinformatics and Statistical Analysis In Metabolomicsmentioning

confidence: 99%

Analytical Methods for Detection of Plant Metabolomes Changes in Response to Biotic and Abiotic Stresses

Piasecka

Kachlicki

Stobiecki

2019

IJMS

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Abiotic and biotic stresses are the main reasons of substantial crop yield losses worldwide. Research devoted to reveal mechanisms of plant reactions during their interactions with the environment are conducted on the level of genome, transcriptome, proteome, and metabolome. Data obtained during these studies would permit to define biochemical and physiological mechanisms of plant resistance or susceptibility to affecting factors/stresses. Metabolomics based on mass spectrometric techniques is an important part of research conducted in the direction of breeding new varieties of crop plants tolerant to the affecting stresses and possessing good agronomical features. Studies of this kind are carried out on model, crop and resurrection plants. Metabolites profiling yields large sets of data and due to this fact numerous advanced statistical and bioinformatic methods permitting to obtain qualitative and quantitative evaluation of the results have been developed. Moreover, advanced integration of metabolomics data with these obtained on other omics levels: genome, transcriptome and proteome should be carried out. Such a holistic approach would bring us closer to understanding biochemical and physiological processes of the cell and whole plant interacting with the environment and further apply these observations in successful breeding of stress tolerant or resistant crop plants.

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Link between carrot leaf secondary metabolites and resistance to Alternaria dauci

Cited by 30 publications

References 49 publications

The Influence of Trichoderma harzianum Rifai T-22 and Other Biostimulants on Rhizosphere Beneficial Microorganisms of Carrot

The Influence of Trichoderma harzianum Rifai T-22 and Other Biostimulants on Rhizosphere Beneficial Microorganisms of Carrot

Severe Stunting Symptoms upon Nepovirus Infection Are Reminiscent of a Chronic Hypersensitive-like Response in a Perennial Woody Fruit Crop

Analytical Methods for Detection of Plant Metabolomes Changes in Response to Biotic and Abiotic Stresses

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