2009
DOI: 10.1093/jhered/esp045
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Localization and Characterization of 170 BAC-Derived Clones and Mapping of 94 Microsatellites in the Hessian Fly

Abstract: Ninety-four microsatellites from enriched genomic libraries of Hessian fly (Hf, Mayetiola destructor [Say]) were localized to 170 cognate clones in an Hf bacterial artificial chromosome (BAC) library. These microsatellite-positive BAC clones were physically mapped to polytene chromosomes by fluorescent in situ hybridization. The mapped microsatellite loci can be used to study the genetic diversity and population structure of Hf.

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Cited by 7 publications
(16 citation statements)
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“…This result was the same for the North American populations (both in K7 and K8), as well as the Old World populations. Both loci under selection were located on chromosome A1; however, Hf119 is located on the short arm and Hf174 on the long arm [29].…”
Section: Resultsmentioning
confidence: 99%
See 1 more Smart Citation
“…This result was the same for the North American populations (both in K7 and K8), as well as the Old World populations. Both loci under selection were located on chromosome A1; however, Hf119 is located on the short arm and Hf174 on the long arm [29].…”
Section: Resultsmentioning
confidence: 99%
“…Sex was not determined for pupal samples, and thus disregarded in any analyses. Eighteen polymorphic microsatellite loci of varying di-, tri-, and one tetra-nucleotide motifs included loci from all chromosomes, based on physical location from hybridization to polytene chromosomes [29] (Table 2). Due to the hemizygous nature of sex chromosomes in males [30] and the possibility of artificially increasing observed homozygosity, only three sex-linked loci were used.…”
Section: Methodsmentioning
confidence: 99%
“…The eluted DNA samples were divided into two stocks and stored at Ϫ20ЊC and Ϫ80ЊC for short-and long-term storage, respectively. Fourteen polymorphic microsatellite loci of varying di-, tri-, and one tetra-nucleotide motifs were selected to give widespread coverage across the chromosomal arms of the polytene chromosomes, including two sex-linked loci (Schemerhorn et al 2009). Some primers were altered to increase the number of loci in pool-plexing, which is the combining of loci during genotyping (Table 1).…”
Section: Methodsmentioning
confidence: 99%
“…To determine recombination frequencies along the long arm of chromosome A1, individual Hessian flies were genotyped for alleles segregating for three sequence tagged sites (STSs) and two simple sequence repeat (SSR) markers (supporting information, Figure S1) that had been discovered previously in BAC sequence data Schemerhorn et al 2009). Each individual was genotyped using its DNA as a template in separate PCRs.…”
Section: Methodsmentioning
confidence: 99%