Aim Evaluate the structure of the aquatic macrophytes assembly of the Jacarecica II Dam, Areia Branca, Sergipe, and verify if distance from the margin is a driver for species richness, and composition in this environment. Methods We settled transects where we plotted quadrats and subplots. The transects were perpendicular in relation to the reservoir margin, and the first quadrat was placed on the margin with the four following ones completely over the water surface. We estimated cover area for each macrophyte species in each quadrat. Each species was also classified according to its life form. We calculated community indexes and tested the influence of the distance from the margin on the structure of macrophyte assemblies. Results We sampled 10 emergent and four free-floating species, resulting in a richness of 14 species. The species with higher importance value were weedy and ruderal species (Salvinia auriculata and Eichhornia crassipes). The distance to the margin caused changes in macrophyte assembly and presented negative relation with species richness. Conclusions The studied assembly presents few species, with some presenting great dominance. This dominance reflects the anthropization of these habitats. Besides, the species composition and richness are modified in the sense that emergent and free-floating species co-occur in marginal quadrats, but only free-floating species occur in quadrats that are in areas that are more distant from the reservoir margin.