Currently, there is an active growth in the use of unmanned systems in various spheres of activity. The qualitative fulfillment by unmanned systems of their target tasks depends on the efficiency of information exchange channels for their control, which consists of several criteria, which makes the problem of its evaluation a multi-criteria one. This article presents the corresponding evaluation methodology, which is based on the use of the probability of achieving a set of functioning goals as a generalized efficiency indicator. To determine the probability, the widely used Rosenblatt-Parzen nuclear estimation method is used. The main stages of the methodology are described and recommendations for its use in the framework of ensuring qualitative fulfillment by unmanned systems of their target tasks are offered.