Microsatellite DNA typing for assessment of genetic variability in Marwari breed of Indian goat

Yadav, Anoop Singh; Gahlot, Kritika; Gahlot, G. C.; Asraf, Mohd; Yadav, M

doi:10.14202/vetworld.2015.848-854

Cited by 5 publications

(5 citation statements)

References 20 publications

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“…To date, the global diversity of local goats has been assessed using various molecular tools, and such studies have been conducted in Spain (Ferrando et al., ; Manunza et al., ), Africa (Awotunde et al., ; Kibegwa, Githui, Jung'a, Badamana, & Nyamu, ; Mdladla, Dzomba, Huson, & Muchadeyi, ), the Americas (Carvalho, Paiva, Araújo, Mariante, & Blackburn, ), Europe (Bulut, Kurar, Ozsensoy, Altunok, & Nizamlioglu, ; Windig et al., ), and Asia (Lin et al., ; Nicoloso et al., ; Waki, Sasazaki, Kobayashi, & Mannen, ; Yadav, Gahlot, Gahlot, Asraf, & Yadav, ).…”

Section: Introductionmentioning

confidence: 99%

“…Most studies primarily consider a relatively small group of breeds within an administrative area; however, due to geographical isolation and adaptation to different nutrient supplies and climates, the population structure always follows the geographical distribution and management history (Ling et al., ; Yadav et al., ). Human social activities play an equally important role in shaping genetic diversity and the evolution of the population genetic structure of domestic animals.…”

Section: Introductionmentioning

confidence: 99%

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Genetic diversity of the Chinese goat in the littoral zone of the Yangtze River as assessed by microsatellite and mtDNA

Guang‐Xin

Zhao

Chen

et al. 2018

Ecology and Evolution

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The objective of this study was to assess the genetic diversity and population structure of goats in the Yangtze River region using microsatellite and mtDNA to better understand the current status of those goat genetic diversity and the effects of natural landscape in fashion of domestic animal genetic diversity. The genetic variability of 16 goat populations in the littoral zone of the Yangtze River was estimated using 21 autosomal microsatellites, which revealed high diversity and genetic population clustering with a dispersed geographical distribution. A phylogenetic analysis of the mitochondrial D‐loop region (482 bp) was conducted in 494 goats from the Yangtze River region. In total, 117 SNPs were reconstructed, and 173 haplotypes were identified, 94.5% of which belonged to lineages A and B. Lineages C, D, and G had lower frequencies (5.2%), and lineage F haplotypes were undetected. Several high‐frequency haplotypes were shared by different ecogeographically distributed populations, and the close phylogenetic relationships among certain low‐frequency haplotypes indicated the historical exchange of genetic material among these populations. In particular, the lineage G haplotype suggests that some west Asian goat genetic material may have been transferred to China via Muslim migration.

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Section: Introductionmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

Genetic diversity of the Chinese goat in the littoral zone of the Yangtze River as assessed by microsatellite and mtDNA

Guang‐Xin

Zhao

Chen

et al. 2018

Ecology and Evolution

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“…The results were higher than those of Indian (Yadav et al, 2015), Brazilian (Menezes et al, 2020) and Chinese goat breed populations along the Yangtze River (Guang-Xin et al, 2018) despite their similarity with Chinese dairy (Wang et al, 2017) and endangered Spanish (Serrano et al, 2009) goat breeds. Therefore, the six goat populations in Chongqing demonstrated rich genetic diversity.…”

mentioning

confidence: 63%

“…However, the large number of highproductivity introduced breeds has led to a decline in the population size of native populations and extensive gene flow between commercial breeds and local populations has affected the conversion of local goat populations (Guang-Xin et al, 2018;Yang et al, 2021). Microsatellite markers in eukaryotes (Yadav et al, 2015) have been widely used to investigate the genetic diversity of a variety of domestic animals, such as deer (Yang et al, 2018), pig (Kharzinova and Zino vieva,20 20) and ch icken (Habimana et al, 2020).…”

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confidence: 99%

Genetic Diversity Estimation of Six Goat Populations from Chongqing, China using Microsatellite Markers

Pan

Zhou

et al. 2022

IJAR

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Goats are an important domestic animal for animal husbandry that has attracted considerable research attention worldwide. Genetic diversity assessment and population genetic structure of indigenous goats can provide valuable conservation strategies. The current study aimed to evaluate the genetic diversity and population structure of six goat populations from Chongqing, China. A total of 145 animals from five local goat populations, namely, Youzhou black (UZG), Jianzhou (JZG), Banjiao (BJG), Dazu (DZG) and Hechuan white goat (HCG) and an introduced breed called Nubia goat (NBG) located in Chongqing, China were genotyped with 18 autosomal microsatellite markers. A series of genetic diversity parameters and population phylogeny were estimated and constructed. This study preliminarily showed that the six goat populations present rich genetic diversity and significant genetic divergence among them. Furthermore, material exchanges were observed between the introduced and local goat populations in Chongqing. This result will further explain the diversity conservation of Chongqing goat populations.

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“…Nevertheless, due to the low costs and to the possibility of inhouse implementation of genotyping protocols, microsatellite markers still represent a useful resource, e.g. to characterize livestock breeds in several developing countries [72,73], in which the access to SNP typing or other high throughput technologies can be difficult or just too expensive, or to set priorities for conservation at the local or regional scale [74,75].…”

Section: Microsatellite Markers In the Livestock Sectormentioning

confidence: 99%

Use of Microsatellites to Study Agricultural Biodiversity and Food Traceability

Bernardi¹,

Colli²,

Ughini³

et al. 2016

Microsatellite Markers

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Molecular markers are useful tools for measuring the genetic diversity among agricultural species. In plants, microsatellites are still the most used markers for germplasm characterization, conservation, and traceability purposes, while in the livestock sector, although having represented the standard for at least two decades, they are still used only for minor farm animal species. In this work, together with a review on the use of microsatellites in livestock, we also illustrate the use of these markers for the characterization of agricultural diversity and food traceability through two case studies: (i) the analysis of genetic diversity in ancient fruit tree cultivars of apple (Malus × domestica Borkh.), pear (Pyrus communis L.), sweet cherry (Prunus avium L.), and sour cherry (Prunus cerasus L.) from Northern Italy and (ii) the molecular authentication of wheat food chain. In the former case, a high genetic variability as well as the presence of different ploidy levels were detected, while in the latter microsatellite markers were shown to be useful for traceability and product authentication along the whole food chain. Overall, the presented evidence confirms the versatility of microsatellites as markers for both agrobiodiversity characterization and food traceability in cultivated plants and farm animals.

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Microsatellite DNA typing for assessment of genetic variability in Marwari breed of Indian goat

Cited by 5 publications

References 20 publications

Genetic diversity of the Chinese goat in the littoral zone of the Yangtze River as assessed by microsatellite and mtDNA

Genetic diversity of the Chinese goat in the littoral zone of the Yangtze River as assessed by microsatellite and mtDNA

Genetic Diversity Estimation of Six Goat Populations from Chongqing, China using Microsatellite Markers

Use of Microsatellites to Study Agricultural Biodiversity and Food Traceability

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